Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0604 ATGGGGTTTGAATATCCTCCAGCAGCAGCAGCAGTAACAACAGTTCATGTAACAGGTTTCAAGAAATTCCATGGAGTTTCGGAGAATCCATCAGAGACTATTGTCAATAACTTGAAGGTGTATATGAATAAGAAAGGTTTACCCAAGGGTTTAGTTATTGGAAGCTGCGACGTACTTGAGACTGCTGGTCAAGGAGCACTTGTTCCCCTGTACCAGACATTGCAATCTTCCATCAGTGCCAAGGAATCCGAATTTTCAAGTTCCAACAAAATTATCTGGCTGCATTTTGGGGTTAACAGTGGCGCAACAAGGTTTGCTATAGAGCGTCAAGCTGTCAATGAGGCTACTTTTCTTTGCCCTGATGAAATGGGATGGAAGCCTCAGAAAGTCCCAATTGTTTCTTCAGATGGTGCAATTTCAGGAATACGTGAGTCTACCCTTCCTGCGGAGGAGATAACCAAGGCCTTAGCAAAGAAAGGTTATGATGTAGTGACTTCCAATGACGCAGGCAGGTTCGTATGCAATTATGTTTACTATCATTCCCTTCGATTTTCCGAGGAGAACAGCACCAAATCCCTTTTTGTGCATGTGCCGCTCTTCTTCACAATTGATGAAGAAACTCAAATGCAATTTGCTGCTTCTTTGTTAGAGATACTTGCTTCTCTATGTTAG 672 0.4271 MGFEYPPAAAAVTTVHVTGFKKFHGVSENPSETIVNNLKVYMNKKGLPKGLVIGSCDVLETAGQGALVPLYQTLQSSISAKESEFSSSNKIIWLHFGVNSGATRFAIERQAVNEATFLCPDEMGWKPQKVPIVSSDGAISGIRESTLPAEEITKALAKKGYDVVTSNDAGRFVCNYVYYHSLRFSEENSTKSLFVHVPLFFTIDEETQMQFAASLLEILASLC* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0604 223 PIRSF Pyrrolidone-crbxlat_pptds 12 223 IPR000816 GO:0005829|GO:0006508|GO:0016920
Lan20g0604 223 Pfam Pyroglutamyl peptidase 15 200 IPR016125 -
Lan20g0604 223 CDD Peptidase_C15 14 221 IPR000816 GO:0005829|GO:0006508|GO:0016920
Lan20g0604 223 PANTHER BNAA09G15240D PROTEIN 11 222 - -
Lan20g0604 223 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 11 222 IPR016125 -
Lan20g0604 223 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 14 220 IPR036440 -
Lan20g0604 223 Gene3D - 11 222 IPR036440 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0604 Lan-Chr20 4716386 4719200 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0604 K01304 - gmx:100305735 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0360 8 5735178 5737819 Lan20g0604 20 4716386 4719200 LSH
Lan20g0604 20 4716386 4719200 Lan4g1322 4 22039410 22042264 LSH