Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0599 ATGGGAGGAGGTGGAGCAATGTCGTACGCGGAGGCGCAGTATATATCGGCGAAAACATCAGTGTGGTGGGACACTGAGAATTGTCAAGTTCCCAAAGATTGCGATCCTCACGCCATTGCTCAGAACATAAGCTCTGCTCTTTTTCACATGAAATATTGTGGCCCCGTTTCTATCTCCGCTTGTGGCGACACCACTCGCATCACTTCTTCTGTTCAAAAAGCCCTCTCCAGCACCGTTACTATTTGTTTTCATCAATTGCGGATGAGGAGATATAATATCCTCCTTGCGCAACCTCAGAGAGCATCAGCACCCCTAGTTGCAGCCGCTAAGAGTGTGTGGTTTTGGACTAGTCTCTTGGCTGGAAAACCTCCTCTTACTAACGGTGAATTACAACTTGGTAATAATAGCTTCCAATCATCTTCAAACACCTTACCAATTCCAGTATCTAATTCCGGTTACATACCGCAACATGTGGACTCCTATTCAGATGCTCATATAGGAAATCCGAAATTTCCAAATACAGGAAGGGGACATCAGGGGAAAACAGCTGGGAGAAGTCCAAGTAAACCAAATGGACCCAATTCTGATATGTTATGGAGCAATAGCAGTGATCAACAGGGCGATCATCAAAATCCACATTCACAGCCTTTAAGATCAAACAGTTTTCCTTCACAACCTCCTTTTGGTTTAACTAGTTAA 699 0.4435 MGGGGAMSYAEAQYISAKTSVWWDTENCQVPKDCDPHAIAQNISSALFHMKYCGPVSISACGDTTRITSSVQKALSSTVTICFHQLRMRRYNILLAQPQRASAPLVAAAKSVWFWTSLLAGKPPLTNGELQLGNNSFQSSSNTLPIPVSNSGYIPQHVDSYSDAHIGNPKFPNTGRGHQGKTAGRSPSKPNGPNSDMLWSNSSDQQGDHQNPHSQPLRSNSFPSQPPFGLTS* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0599 232 MobiDBLite consensus disorder prediction 157 232 - -
Lan20g0599 232 PANTHER LIMKAIN B LKAP 2 78 IPR024768 GO:0005777|GO:0010468|GO:1903231
Lan20g0599 232 PANTHER LIMKAIN B LKAP 83 214 IPR024768 GO:0005777|GO:0010468|GO:1903231
Lan20g0599 232 CDD PIN_limkain_b1_N_like 18 98 - -
Lan20g0599 232 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 83 214 - -
Lan20g0599 232 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 2 78 - -
Lan20g0599 232 MobiDBLite consensus disorder prediction 179 232 - -
Lan20g0599 232 Pfam NYN domain 18 77 IPR021139 GO:0004540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0599 Lan-Chr20 4680189 4681417 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0599 7 164 C2H2 Transcription Factor Family AT5G61190 45.366 6.30e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0599 - - lang:109335418 486.108