Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0587 ATGGAGAAACATTTCTGGGTTGGCATTATAATAGTGATAGGACTTGTTTCTAGTAACTTGGCTGATGCCTTTGAAACCTATCACATCAATGAAACAGAGTTGTCCTTGTTGGAAGCTCATGAAGTATCTGAATCTTTGGTTGGGAGGAATCCTCTTATGGTTGGAATCACTCTTATTCAAGCTGCTGCTGCTAAAGGAGCAGTGTGTACAGATGGAACCTTGCCTGCTTATCATTTGCATCGGGGATATGGATCCGGCGCAAATAGTTGGCTTGTTAATCTAGAGGGAGGTGGATGGTGTAATAATGTTAGATCATGTGTTTTTCGCAAGAAAACACGGCGTGGATCATCTGCGTTCATGGAAAGGGAGATACCCTTTACAGGAATATTAAGCAATAATCCTCAAGAAAATCCAGATTTTTTCAACTGGAACAGAGTAAAGATTCGTTATTGTGATGGTGCCTCTTTTACTGGAGATAGCGAACATAGGGATGCACAACTGCAATTCAGAGGAGAACGTATTTGGTGGGCTGCAATTGAGGAGTTGAAATCAAAGGGAATGCGTTTTGCCAAGCAGGCTCTTCTTTCTGGATGCTCTGCTGGTGGTTTGGCTACTATCATACACTGTGACGAGTTTCGAGGTCTATTCCCAAGGACTACCAAAGTAAAGTGTCTTAGTGATGCTGGGTTATTTCTTGATGCGCCAGATGTATCTGGTGGACATACCCTCAGGGATTTTTTCACTGGTGTTGTAAATTTGCAGGGGGTGCAGAAGAATCTGCCATTCACTTGCACTAATCACCTTGATCCCACTTCGTGCTTCTTTCCTCAGAACTTGATTGGTAGTGTTAGAACCCCGCTATTCATTCTTAATACCGCCTATGATTCATGGCAGATCCAGTCAAGCTTAGCTCCTCCATCAGCAGATCCCCATGGCTATTGGCGCAATTGTAGATCAAACCATGCTAAATGTACTGGTTCACAAATCCGATTTCTGCAAGGATTCAGGAATCACATGCTGAATGTTGTTAAGGGTTTTTCAAGATCAAATCAGAATGGGTTGTTCATAAATTCATGTTTTGCTCACTGCCAATCTGAGAGGCAGGATACATGGTTTGCGGACAATTCCCCTGCCATTGGGAACAAGGCAATTGCTCTGGCTGTAGGAAGTTGGTATTTCGACCGTGCCGTTGTTAAGGACATTGATTGTCCTTACCCTTGTGATAACACATGCCACAATCTGGTTTTCAGACAAACCAAATCTCATCAATAA 1272 0.4292 MEKHFWVGIIIVIGLVSSNLADAFETYHINETELSLLEAHEVSESLVGRNPLMVGITLIQAAAAKGAVCTDGTLPAYHLHRGYGSGANSWLVNLEGGGWCNNVRSCVFRKKTRRGSSAFMEREIPFTGILSNNPQENPDFFNWNRVKIRYCDGASFTGDSEHRDAQLQFRGERIWWAAIEELKSKGMRFAKQALLSGCSAGGLATIIHCDEFRGLFPRTTKVKCLSDAGLFLDAPDVSGGHTLRDFFTGVVNLQGVQKNLPFTCTNHLDPTSCFFPQNLIGSVRTPLFILNTAYDSWQIQSSLAPPSADPHGYWRNCRSNHAKCTGSQIRFLQGFRNHMLNVVKGFSRSNQNGLFINSCFAHCQSERQDTWFADNSPAIGNKAIALAVGSWYFDRAVVKDIDCPYPCDNTCHNLVFRQTKSHQ* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0587 423 PANTHER PECTIN ACETYLESTERASE 4 416 - -
Lan20g0587 423 PANTHER NOTUM-RELATED 4 416 IPR004963 GO:0016787
Lan20g0587 423 Pfam Pectinacetylesterase 50 396 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0587 Lan-Chr20 4556889 4561339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0587 1 418 Carbohydrate Esterase AT1G57590 65.558 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0587 K19882 - gmx:100788448 708.368