Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0576 ATGGGTAATGGTACTTCTCGTGTTGTTGGCTGTTTGGTACCATTCAATGGCAAAGGTGTTGATTTGGAGTTTCTAGAGCCATTAGATGAAGGGTTAGGTCATTCCTTCTGTTATGTGAGACCATCCATATTTGAATCTCCTGCCATTACCCCGTCAAATTCTGAGAGGTATACTCTTGATTCCAGTACCCTTGATTCGGAAACTTTGAGCGGATCCTTTAGGCATGATAGCATGGAAGATTCTTCTGGCATACACAAGCCGAGTAAGAATTTTCCGGAAACTACTTTTAAGACAATTTCGGGGGCTTCTGTCAGTGCCAATGTTTCCACTGCAAGGACTGGTAACCAGAGTGCATTGTTTGCTAGTGATGCCCTGGAACCTGCTGCTTCGTTTGAGGGAACTGCCTCATTTGCTGCTATCCCTTTGCAGCCTGTTCCGCGTGGTTCTGGACCTTTGAATGGTTTCATGTCCGGGCCTCTGGAGAGAGCTTATGCCTCAGGTCCGTTGGATAGGGGTGGTGGTTTCATGTCTGGGCCAATAGAGAAGGGAGTTATGTCAGGCCCTCTTGATGATAACGATAAATCCAACTTTTCAGCACCCCTTGCACATGGTCGCCGGAGGCCTCGTCTCCAACATCTCATGAGAAGTGTAAGTGGACCAATGAAGAATACCTTTTCTCGGACTTTCTCTAAGAACTCTACCAGTGGCAGTTGGATGCAACGGTTATTGTTTCATCCAGTGACCCAACTAGCTTGGCATTCCAGAGAGGCAAAGTGTCGATCCGAAGTTGCTAGAAATTGTGGTGAAGTTGGACCATCTGAAGTGGAGTATAAACATACACATAATTTGCAGTGGGCTCAAGGCAAGGCTGGTGAAGATAGGGTTCATGTAGTGCTTTCTGAAGAACAAGGGTGGCTGTTTATTGGGATATATGATGGTTTTAGTGGCCCAGATGCACCTGATTTTCTGATGAGCCATCTTTATAGATTTATAGACATGGAACTGGAGGGGTTACTTTGGGATTATGAAGATAATCCGGTAGATCCACATCCACTTGAACCTGAAGTCCCTAAAACTGTAAAATCTATGGCTGCTCCAGTAAGCAATAGGGGGGAACTATGTGATGTTCATGCTAATTCAAATCAAGGAAGTTTAGGTTCTTCTTCTGGTCCAGTAATAATCCAGGATCAGTCATCTAACCGTGAGATAGTTGAGGATAATGCTGAAAACAAGTTACCTAACTGCGGAAGTTCGACAATCCCATGTACTGCTCCAGCCTCTGTTCCATTTGGACAATTGTCGGGTAAAGGTAGAAAAAGTGTGCGGCTTTATGAGCTACTTCAGATGGAATCTTGGGATGAACAGGGTCTTTTCCCCGCCTCAGAACAAGGTAAAGATTCTTCTGTTCCTAGGGAGTCTACACTAGAGGGGCATATGAGACCTTGCTCATCTAATTTAAAAGAAGAAATATCCAGAAATTGGGATGAAGATCCCACTACATCAGGAAAAGATGGAAGCATTGGGTTCGATGCAACTAAACAGGAGCAAATAGCTGCTTTTTCTGTTTCAGCGCAACGGCAGAATTCAAGAAAGTCATTTATCAATACAAAACTCAGACAAATGTACAGGAAGCCAAAGTCCCTATGTAAGAAACTTTTTCCTTGGAGTTATGATTGGCATAGGGAGGAAGCTTTTGTTGATGAGAAACTAGTGGAAGCCTCAGGACCCATTAGAAGATGCAAGTCTGGAATCGATCATAATGCAGTTTTAAGAGCAATGGAACGAGCCCTTGAAAGAGCAGAAGAGGCGTACATGAAAATGGTGGAGAATAATCTGGATAAAAATCCAGAGCTTGCTTTAATGGGATCGTGTGTTCTAGTGATGCTGATGAAGGATCAAGATGTTTATGTCATGAACCTTGGAGATAGTTGTGTGATTTTGGCTCAAGAAAGACCAAATGATCGTCATCCTAATCCAAGTTCTGTCAAGGATGAAAAGAGGCATAAAAATCGATCTAGAGAGTCATTAGTACGCATGGAGCTGGATCGGATTTCAGAGGAGTCCCCAATTCACAATCAAAACAGTGATGTTAATAAGATGAACAAAAACAGAGAAATATCTATATGCAGATTGAAAATGAGGGCTGTTCAGGTTTCCATAGATCACAGCACAAATACTGAAGAGGAAGTTTTTAGAATAAGAACAGAACATCCTGATGATAATCAAGCCATATTTAATGGTAGAGTGAAAGGACAATTAAAAGTCACCAGAGCATTTGGTGCTGGGTTCTTGAAGAGGCCATCTTTCAACGAAGCTCTGCTGGAGATGTTTCAAGTTGATTATGTGGGAACTGCTCCTTACCTAAGTTGCACACCTTCTGTTTTGCATCACAGACTTTCGTCAAGTGACCAGTTCTTGGTACTCTCCTCTGATGGGCTTTACCAATATTTCAGCAATGAAGAGGTAGTAGCCCATGTTACGTGGTTCATGGAAAATGTCCCCGAAGGTGACCCCGCACAATACCTTATTGCCGAGCTTCTCTTCCGCGCTGCTAAAAAGAATGGAATGGATTTTCATGAATTGCTTGATATTCCTAATGGGGATCGACGTAAATATCATGATGATGTATCTGTTATGGTGGTTTCTTTGGAAGGGAGAATTTGGAAATCATCAGGATAA 2679 0.4285 MGNGTSRVVGCLVPFNGKGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERYTLDSSTLDSETLSGSFRHDSMEDSSGIHKPSKNFPETTFKTISGASVSANVSTARTGNQSALFASDALEPAASFEGTASFAAIPLQPVPRGSGPLNGFMSGPLERAYASGPLDRGGGFMSGPIEKGVMSGPLDDNDKSNFSAPLAHGRRRPRLQHLMRSVSGPMKNTFSRTFSKNSTSGSWMQRLLFHPVTQLAWHSREAKCRSEVARNCGEVGPSEVEYKHTHNLQWAQGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRFIDMELEGLLWDYEDNPVDPHPLEPEVPKTVKSMAAPVSNRGELCDVHANSNQGSLGSSSGPVIIQDQSSNREIVEDNAENKLPNCGSSTIPCTAPASVPFGQLSGKGRKSVRLYELLQMESWDEQGLFPASEQGKDSSVPRESTLEGHMRPCSSNLKEEISRNWDEDPTTSGKDGSIGFDATKQEQIAAFSVSAQRQNSRKSFINTKLRQMYRKPKSLCKKLFPWSYDWHREEAFVDEKLVEASGPIRRCKSGIDHNAVLRAMERALERAEEAYMKMVENNLDKNPELALMGSCVLVMLMKDQDVYVMNLGDSCVILAQERPNDRHPNPSSVKDEKRHKNRSRESLVRMELDRISEESPIHNQNSDVNKMNKNREISICRLKMRAVQVSIDHSTNTEEEVFRIRTEHPDDNQAIFNGRVKGQLKVTRAFGAGFLKRPSFNEALLEMFQVDYVGTAPYLSCTPSVLHHRLSSSDQFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNGMDFHELLDIPNGDRRKYHDDVSVMVVSLEGRIWKSSG* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0576 892 SUPERFAMILY PP2C-like 288 884 IPR036457 -
Lan20g0576 892 Pfam Protein phosphatase 2C 708 854 IPR001932 -
Lan20g0576 892 ProSiteProfiles PPM-type phosphatase domain profile. 276 883 IPR001932 -
Lan20g0576 892 Coils Coil 590 610 - -
Lan20g0576 892 MobiDBLite consensus disorder prediction 482 499 - -
Lan20g0576 892 CDD PP2Cc 589 883 IPR001932 -
Lan20g0576 892 MobiDBLite consensus disorder prediction 656 674 - -
Lan20g0576 892 MobiDBLite consensus disorder prediction 68 90 - -
Lan20g0576 892 MobiDBLite consensus disorder prediction 650 674 - -
Lan20g0576 892 MobiDBLite consensus disorder prediction 455 508 - -
Lan20g0576 892 PANTHER PROTEIN PHOSPHATASE 2C 15 892 IPR015655 GO:0004722|GO:0006470
Lan20g0576 892 PANTHER PROTEIN PHOSPHATASE 2C 32 15 892 - -
Lan20g0576 892 SMART PP2C_4 276 881 IPR001932 -
Lan20g0576 892 Gene3D - 481 889 IPR036457 -
Lan20g0576 892 Gene3D - 253 410 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0576 Lan-Chr20 4426911 4433808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0576 1 892 PP2C-type Phosphatase Gene Family AT2G46920 64.191 0.0 1097
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0576 - - cam:101510249 1417.14