Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0572 ATGACAAACAAGACTACAATGAAGCTGGTTTTGTTAGCCGTTGGATTTGCATGCTTAGTTTCTGGGGTTATTTCCTCTGGATCTGACACACACTCTATGCTTTCCTTCTTAGAAAATGGTGCTGTCTCAGTTTCGAGTACAAAGCCTTCTTCTTTACCCCAACCTGTCATGGTTGGCCTCACTCTTATTGAGGGAGCTGCTTCTACAGGAGCTGTGTGTTTGGATGGAACATTACCTGGTTACCATTTGGATCGTGGATTTGGATCCGGTGCAAATAGTTGGCTAGTTCATTTGGAGGGAGGAGGATGGTGTAATACCATTAGAAACTGTGTCTACAGAAAAGCTAGTCGTCACGGTTCCTCAAAGTATATGGAAAGTCAAATACCATTCATGGGAATATTGAGCAATAAAGCTGAAGAAAACCCTGATTTCTTTAATTGGAACAGAATCAAATTAAGGTACTGTGATGGGGCATCTTTCAGTGGTGATAGTCATGATGAGTCTGCACAGCTTCAATTCCGAGGACAAAAGATATGGCTAGCTGCAATGGAGGAATTAATGTCCAAAGGAATGCAGAATGCTGAACAGGCCCTTCTCTCTGGATGCTCCGCGGGTGGTCTGGCGTCTATAATACACTGTGATGAGTTCCGGAACTCGTTTCCAGAATCTACCAAAGTTAAATGTTTGAGTGATGCAGGATTTTTTCTTGACGCAACTGATGTATCTGGAGGCCACACACTGAGGAATCTATTTGAAGGTGTAGTTCAGTTGCAGGAGGTACAAAAGAATTTGCCAAGTAGTTGTCTCAACAAACTGGATCCGACTTCGTGCTTCTTTCCTCAGAATATGGCTGAGCATGTTCAGACTCCATTGTTTATACTCAATGCGGCTTATGATTCTTGGCAGGTTCAAGCCAGTTTAGCCCCACCTTCAGCTGACCCCTTTGGCTATTGGAATGACTGCAAATCAAACCATGCAAATTGTAGCTCATCTCAAATTCAGTTCCTCCAAGACTTCAGAGTTCAATTGCTAAATGACTTGAAAGACTTCTCAAGTTCATCTCAAACCGGGCTATTCATAAATTCTTGTTTTTCTCATTGCCAGTCTGAGAGACAAGGGACATGGTTTTCTGATGATTCTCCCCTTCTTGGGAACACGCCAATTGCAGTTGCTGTGGCAGACTGGTATTTTGATAGAGAAGTTGTCAAAGCTATTGACTGTGCCTACCCCTGTGATAACACCTGCCATCATCTGGTTTTTAAGTGA 1266 0.4297 MTNKTTMKLVLLAVGFACLVSGVISSGSDTHSMLSFLENGAVSVSSTKPSSLPQPVMVGLTLIEGAASTGAVCLDGTLPGYHLDRGFGSGANSWLVHLEGGGWCNTIRNCVYRKASRHGSSKYMESQIPFMGILSNKAEENPDFFNWNRIKLRYCDGASFSGDSHDESAQLQFRGQKIWLAAMEELMSKGMQNAEQALLSGCSAGGLASIIHCDEFRNSFPESTKVKCLSDAGFFLDATDVSGGHTLRNLFEGVVQLQEVQKNLPSSCLNKLDPTSCFFPQNMAEHVQTPLFILNAAYDSWQVQASLAPPSADPFGYWNDCKSNHANCSSSQIQFLQDFRVQLLNDLKDFSSSSQTGLFINSCFSHCQSERQGTWFSDDSPLLGNTPIAVAVADWYFDREVVKAIDCAYPCDNTCHHLVFK* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0572 421 PANTHER PECTIN ACETYLESTERASE 6 420 - -
Lan20g0572 421 Pfam Pectinacetylesterase 54 401 IPR004963 GO:0016787
Lan20g0572 421 PANTHER NOTUM-RELATED 6 420 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0572 Lan-Chr20 4400376 4407875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0572 4 420 Carbohydrate Esterase AT3G62060 63.850 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0572 K19882 - gmx:100786972 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0958 16 16648381 16654025 Lan20g0572 20 4400376 4407875 PCT
Lan20g0572 20 4400376 4407875 Lan16g0958 16 16648381 16654025 PCT