Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0561 ATGGGTCCTTCATGTGATTTCACTGTGAGTCTAATCAATGAAGAAGTGGTAACGTCGGTGCTGCCAATGCAAGAGCGGTGGCTACCACTCTCAAACCTTGATCTGCTTCTTCCTCCGTTGAATGTTGGGGTCTTTTTTTGCTACAAGAATTGCACAAAAACGAACTTTGGATCCATGGTGAGGTCTCTGAAAAAGGGTTTAGCACAGGCTTTGGTGTCATACTATGCCCTTGCAGGTGAAGTGGTTGTCAACAGTATAGGTGAACCTGAACTGCTTTGTAATAATCGTGGGGTTAATTTTGTTGAAGCTGTAGCAGACATTGAACTACAGTGCCTCAACTTTTACAACCCTGATCATACATTTCAAGGGAAGCTTGTTCCAGAGAAGAAGCATGGTGTCCTTGCTGTTCAGGCAACGTGGCTCAAGTGTGGTGGGGTAGTAGTTGCATGCACATTTGATCATCGCATAGCTGATGCCTACTCAGCAAATATGTTCCTCGTATCATGGGCCGAGATGGCCCGGCCCATCAAGCCCGCATCAACGCTTAACTCTCCGCCATGTTTCCGTCGTTCCCTTCTCAGCCCTCGCCGTCGTTCCATCCACCCTTCCATCGACAACATGTACATCCCCATCTCCAACATCTCTCCTCCTCCTTCAATCACCACCGACGCCACCGTTATCCTCAGCCGCATATACTATGTCATGGCAGAGGATCTCCACTTCATGCAGTCGCTTGCCACCAATAACGGCACTGCTAAACGCACAAAGCTCGAGTCTTTCTCCGCGTTCTTGTGGAAGATGGTTGCTCGTGCAGCTTCAATAGAAAAAAACGGCAAAAGGGTCATCGCTAAAATGGGTATTGTGGTTGATGGAAGGAAGTGTCTTAGTCTTAGCAATTGTGGTGATAATAAAGGGAAAAACGAACTGATGGGTTGTTATTTTGGGAACGTGCTTTCCATTCCATTTGGCGAGAAACCGGTGGATGAGCTGGTAGAGAAGCCGTTATGGTGGGTGGCGGATGAGGTTCATGAGTTCTTGGCAACGGCGGCGACGGAGGAGCACTTCTTAGGGCTTATTGACTGGGTGGAAGCACACCGGCCAGTCCCTGGTTTGGCGCGAATTTATTGTGGTGGAAGCGATGAGGGACCAACTTTTGTGGTTTCTTCCGGACAAAGGTTCCCACAGGAGAAAGTGGATTTTGGTTGGGGTAAGGCTGTTTTTGGATCGTACCATTTTCCATGGGATGGAGAAGCTGGTTATGTGATGCCAATGCCGAGTCCTGTTCGGAATGGTGATTGGGTTGTATACATGCACCTTGAGGAGGGATTGTTGGAGATAATAGAGTGTGAGGCTGCTCATGTATTTAAGCCCTTAACTTGGGATTACCTAACTAAGTGGGATGGGGATCACCTGTCCCAACTTGGTGTCCCTAATCCTGTCCCGGTCAATTAA 1452 0.4828 MGPSCDFTVSLINEEVVTSVLPMQERWLPLSNLDLLLPPLNVGVFFCYKNCTKTNFGSMVRSLKKGLAQALVSYYALAGEVVVNSIGEPELLCNNRGVNFVEAVADIELQCLNFYNPDHTFQGKLVPEKKHGVLAVQATWLKCGGVVVACTFDHRIADAYSANMFLVSWAEMARPIKPASTLNSPPCFRRSLLSPRRRSIHPSIDNMYIPISNISPPPSITTDATVILSRIYYVMAEDLHFMQSLATNNGTAKRTKLESFSAFLWKMVARAASIEKNGKRVIAKMGIVVDGRKCLSLSNCGDNKGKNELMGCYFGNVLSIPFGEKPVDELVEKPLWWVADEVHEFLATAATEEHFLGLIDWVEAHRPVPGLARIYCGGSDEGPTFVVSSGQRFPQEKVDFGWGKAVFGSYHFPWDGEAGYVMPMPSPVRNGDWVVYMHLEEGLLEIIECEAAHVFKPLTWDYLTKWDGDHLSQLGVPNPVPVN* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0561 483 Gene3D - 221 449 IPR023213 -
Lan20g0561 483 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 460 - -
Lan20g0561 483 Gene3D - 8 206 IPR023213 -
Lan20g0561 483 Pfam Transferase family 8 451 - -
Lan20g0561 483 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 9 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0561 Lan-Chr20 4255479 4258595 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0561 31 448 Monolignol Biosynthesis Gene Families AT5G48930 26.047 4.53e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0561 - - gmx:100785067 632.484