Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0545 ATGGAGAGTAAAACCTCCCCTAAACAAGACTCAGAAGCATCTCCAGAGCTCAAACCAGAATCTAATACACCCCAGAAACGGAAAATGGTTCAAAAAACGGTGGTCATGGTGAAGATAGGAGAGAATGTTAGCAAACTAAAGAATGAAGGGCTGCCTTCTGATTCTTGGTCTTGGAGGAAATATGGACAAAAGCCGATTAAAGGGTCTCCTCATCCAAGGGGATATTATAGGTGCAGCACATGCAAGGGTTGTTTAGCAAAAAAGCAAGTAGAGAGATGCAGAACAGATGCATCAATGCTCATAATCACTTATACCTCTACACATAACCACCCAGCTCCTAATCATGCCCCATCCTCCACAAATTTAGTCCAAAAACCAAAACAACCTGAAACCCAAACCACCAAATATGAACCTAGTATTCTTACCCTAAAAGAAGAAGACCAAGAAAGGAAACAAGAGAAGGTGATGAATCATAATGTGTCCACCGTGACAAGTCATGACAATGGTACTAATGAAGAAAAGTTTCATTACTTGCAATCTCCAACACCCAGCACTGAGGATATTATAGACCAACATGATGTTTTAAAACTCAACAACCAAGAGAAAACCCATGACAATATAGATCTCCTCTTAGAGGTAGAGGCTATGTCTCATTCACAAATCAAGAACATGCCAGCACCTAAATCAGAAGAATTTGATTTTTTCGATGAACTTGAGGAACTACCCATGTCATCATCTTTCCTAGACTATACAAGGAGCAGTTTTTCCAATGAAATGATTCCCATTGTCCCTTCTTGA 798 0.3997 MESKTSPKQDSEASPELKPESNTPQKRKMVQKTVVMVKIGENVSKLKNEGLPSDSWSWRKYGQKPIKGSPHPRGYYRCSTCKGCLAKKQVERCRTDASMLIITYTSTHNHPAPNHAPSSTNLVQKPKQPETQTTKYEPSILTLKEEDQERKQEKVMNHNVSTVTSHDNGTNEEKFHYLQSPTPSTEDIIDQHDVLKLNNQEKTHDNIDLLLEVEAMSHSQIKNMPAPKSEEFDFFDELEELPMSSSFLDYTRSSFSNEMIPIVPS* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0545 265 MobiDBLite consensus disorder prediction 108 135 - -
Lan20g0545 265 SUPERFAMILY WRKY DNA-binding domain 49 113 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan20g0545 265 MobiDBLite consensus disorder prediction 1 25 - -
Lan20g0545 265 MobiDBLite consensus disorder prediction 1 31 - -
Lan20g0545 265 PANTHER WRKY TRANSCRIPTION FACTOR 69-RELATED 15 248 - -
Lan20g0545 265 SMART WRKY_cls 52 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan20g0545 265 ProSiteProfiles WRKY domain profile. 47 113 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan20g0545 265 Gene3D WRKY domain 37 114 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan20g0545 265 Pfam WRKY DNA -binding domain 54 111 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan20g0545 265 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 248 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0545 Lan-Chr20 4103789 4105192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0545 11 146 WRKY Transcription Factor Family AT4G01250 50.345 2.37e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan20g0545 WRKY 1.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0545 - - gmx:100127368 295.049