Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0541 ATGGCTTCGATTCAACGCGCTTCCGCGAGTTCTGGATCCGAAGGTGGAGAACCTGCTACAGTGGACGATAGGAAGAGGAAGAGAATGATATCGAACCGCGAATCCGCGAGGCGATCACGGTTGAGGAAGCAGAAGCTTCTAGAAGATTTGACTGAAGAAGTGAATCGTTTGCAAAGCTCAAACAGGGAGATAGTCCAGAACATCAAAACGAAGGAGGATGCGTATTCGAAAAAGGAATCTGCGAACAACATTCTCAGAGCTCAGACCACGGAACTCGCGGATCGGTTACAGTCTCTGAATTCGATCATTAACAGAGCTGAAGAAGTTAACGGAAAAAGTAATGGTTTCTTCTATCAGATATCTCAGATTTCAGATCCACTCATGAATCCGTGGCAGCAAAATTATCCGTTTTATCCTCTCATGCCGTCTCCTAATATGTTCCTGCATTGA 450 0.4533 MASIQRASASSGSEGGEPATVDDRKRKRMISNRESARRSRLRKQKLLEDLTEEVNRLQSSNREIVQNIKTKEDAYSKKESANNILRAQTTELADRLQSLNSIINRAEEVNGKSNGFFYQISQISDPLMNPWQQNYPFYPLMPSPNMFLH* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0541 149 SUPERFAMILY Leucine zipper domain 24 72 IPR046347 GO:0003700|GO:0006355
Lan20g0541 149 CDD bZIP_plant_GBF1 25 76 IPR045314 GO:0003700|GO:0006355
Lan20g0541 149 MobiDBLite consensus disorder prediction 1 15 - -
Lan20g0541 149 MobiDBLite consensus disorder prediction 18 41 - -
Lan20g0541 149 Pfam bZIP transcription factor 23 82 IPR004827 GO:0003700|GO:0006355
Lan20g0541 149 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 146 - -
Lan20g0541 149 Gene3D - 23 80 - -
Lan20g0541 149 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 22 69 IPR004827 GO:0003700|GO:0006355
Lan20g0541 149 MobiDBLite consensus disorder prediction 1 41 - -
Lan20g0541 149 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 27 42 IPR004827 GO:0003700|GO:0006355
Lan20g0541 149 Coils Coil 33 67 - -
Lan20g0541 149 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 146 - -
Lan20g0541 149 SMART brlzneu 20 84 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0541 Lan-Chr20 4072167 4073282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0541 1 147 bZIP Transcription Factor Family AT3G62420 45.946 3.20e-37 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan20g0541 bZIP_1 1.4e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0541 K25786 - gmx:780550 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0401 8 6163996 6165130 Lan20g0541 20 4072167 4073282 LSH
Lan20g0541 20 4072167 4073282 Lan4g1369 4 22638306 22639517 LSH