Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0520 ATGTCCAATTCCACCAATTCACATTCCCCTAATTCTAAGGGTTTCCTCTGCAATGCTGGCGCTGGTGCTGCTGCAGGATTTATTGCTGCTGCATTTGTTTGCCCTTTAGATGTTATCAAAACTCGGTTACAGGTTCAAGGGGCCCCTCAGCTTCGTAATTCAAATGTTAAAGGCAGTCTCATTGTTGGTACTTTGGAACAAATATTTGAAAGGGAGGGTTTGCGTGGCATGTACCGAGGGCTAGCCCCAACTGTGTTGGCTTTACTTCCGAACTGGGCTGTTTATTTTACTATATATGAGCAATTCAAGAGCCTGCTTTCCACTGATGAAAGTCACCATCTTTCAATTGGAGCTAATGTGGTAGCTGCTTCTGGGGCTGGAGTTGCAACTACCATTGCTACAAATCCACTTTGGGTTGTCAAGACTAGGCTCCAAACCCAGGGAATGAGACCTGGTGTTGTGCCATACAAGAGCACACTATCTGCTTTAAGAAGAATTTCTCATGAGGAGGGCATTCGAGGGCTGTACAGTGGCCTTGTACCTGCTCTGGCTGGTATCAGTCATGTTGCCATCCAGTTTCCCACTTATGAGAAAATAAAATTTTATTTGGCAAAACAAGATGACACAGCAATGGAAAAGCTTGGCGCACGTGATGTTGCAATTGCTTCATCGGTCTCCAAAATTTTTGCGTCCACTTTGACATATCCTCATGAAGTTGTTCGTTCTAGACTTCAAGAACAAGGGCACCACTCAGAAAAGCGGTACTCTGGTGCGACTGACTGTATTAGAAAGATATTTCAACAAGAGGGCCTTTCCGGTTTTTACCGTGGGTGTGCCATCAACCTACTGAGGACAACACCAGCTGCTGCAATCACATTCACCAGCTTTGAAATGATAAACCGTTTTCTTGTTTCACGCTTCCCTTCTGATCCTTGTCCTCCTATTTTGTGA 951 0.4479 MSNSTNSHSPNSKGFLCNAGAGAAAGFIAAAFVCPLDVIKTRLQVQGAPQLRNSNVKGSLIVGTLEQIFEREGLRGMYRGLAPTVLALLPNWAVYFTIYEQFKSLLSTDESHHLSIGANVVAASGAGVATTIATNPLWVVKTRLQTQGMRPGVVPYKSTLSALRRISHEEGIRGLYSGLVPALAGISHVAIQFPTYEKIKFYLAKQDDTAMEKLGARDVAIASSVSKIFASTLTYPHEVVRSRLQEQGHHSEKRYSGATDCIRKIFQQEGLSGFYRGCAINLLRTTPAAAITFTSFEMINRFLVSRFPSDPCPPIL* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0520 316 Gene3D Mitochondrial carrier domain 110 306 IPR023395 -
Lan20g0520 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 214 302 IPR018108 -
Lan20g0520 316 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 4 313 IPR044712 GO:0006862|GO:0055085
Lan20g0520 316 Pfam Mitochondrial carrier protein 220 305 IPR018108 -
Lan20g0520 316 Pfam Mitochondrial carrier protein 13 108 IPR018108 -
Lan20g0520 316 Pfam Mitochondrial carrier protein 114 206 IPR018108 -
Lan20g0520 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 105 IPR018108 -
Lan20g0520 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 114 202 IPR018108 -
Lan20g0520 316 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 4 313 - -
Lan20g0520 316 SUPERFAMILY Mitochondrial carrier 13 298 IPR023395 -
Lan20g0520 316 Gene3D Mitochondrial carrier domain 1 109 IPR023395 -
Lan20g0520 316 PRINTS Mitochondrial carrier protein signature 31 45 IPR002067 GO:0055085
Lan20g0520 316 PRINTS Mitochondrial carrier protein signature 80 100 IPR002067 GO:0055085
Lan20g0520 316 PRINTS Mitochondrial carrier protein signature 129 147 IPR002067 GO:0055085
Lan20g0520 316 PRINTS Mitochondrial carrier protein signature 223 245 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0520 Lan-Chr20 3865953 3870567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0520 4 310 Chloroplast and Mitochondria Gene Families AT2G47490 76.221 2.76e-167 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0520 K15115 - gmx:100803094 505.753