Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0519 ATGGCGGCATTATCGTTTTCATTGTCTTCTGTGGTAGAGGATGTGCTTCAACAGCATAGTACTCGCCTCAAAGATCTTGATTTGGAGTCTAGAAAAGCAGAAGAAGCTGCATTCAGAAGGTATGATGCAGCAGGGTGGCTGAGAAAAATGGTTGGAGTTGTTGCAGCTAAAGATTTACCAGCAGAGCCATCTGAGGAAGAGTTTAGGCTTGGTCTGAGAAGTGGGATCATCCTCTGCAATGTTCTTAACAAGGTTCAACCTGGTGCTGTGCCCAAGGTTGTGGAGACTCCTGTTGATTCTGCATTAATCCCTGATAAGGGACCATTATCAGCATTTCAGTATTTTGAAAATGTGAGGAACTTTTTGGTGGCTATCCAGGAAATTGGAATTCCTACCTTTGAGGCATCTGATCTTGAACAAGGAGGAAAATCAGCCAGGGTTGTGAACAGTGCATTGGCCCTTAAATCCTATAGTGAATGGAAACAGACTGGGGCTAATGGTGTGTGGAAATTTGGTGGGACTATCAAACCAACAACCTCTACAAAAACATTAGAGAGAAAAAACTCAGAGCCGTTTACTAATTCCTTGTCAAGGAACTCCTCCATGACTGAAAAATCTCTAGCTGGTTTCAACTCTGATGTTGACTCTAATAAAATGTCTGGTTCTTATTCCTTGAGTATGCTTGTTCGTGCAATTCTATTAGATAAGAAGCCAGAAGAAGTTCCACAGTTGGTTGAATCTGTTTTGAATAAGGTTGTAGAAGAATTTGAGCATCGCATCGCAAGCCAATGTGAACAGACAAAAGTAACTTCAAGAGCTGCTGCTTCTCAAAGCATTGGATCTATATCGAAGTTTGTTACGGAAGATAAAAAGGTGCAGAACAAGATTCCAATGGTAACAAAGAAAGAGGGATTCATCCATAAAAAACATGTTGATGATGAGGAGACAAAAGGACAACTTCTGAGGAAGCAGATGCTCTTTGATCAACAGCAACGAGATATTCATGAACTAAAGCATACAATTCACACCACAAAAGCTGGTATGCAGTTCATGCAAACGAAATTTCATGAGGAGTTCTCCAATCTCGGCTTGCACATTCATGGTTTAGCTCATGCTGCTTCTGGATATCACAGAGTTCTTGAAGAAAACCGCAAACTATATAATCAAATCCAGGATCTTAAAGGAAGTATTAGAGTGTACTGTCGAGTAAGACCCTTCTTATCTGGAAGACCAAATTTTGTGAACACTGTGGATAGTATAGAAGATGGAACTATCACAGTTAATATTCCTTCAAAGAATGGGAAAGGACGAAGATCCTTCAACTTCAACAAAATCTTTGGACCATCTTCTGGCCAAGTGGAGGTCTTCTCTGATATGCAGCCACTCATTAGGTCTGTTCTTGATGGTTTTAATGTTTGCATATTTGCTTATGGCCAAACAGGATCAGGAAAAACTTACACTATGACTGGGCCGAAAGAGATCACAGAGAATAGCCAAGGTGTAAATTACAGAGCTCTAAGTGATTTGTTTCTTACAGCAGATCAAAGAAAGGAAACTTTTCACTATGACGTGTCAGTTCAAATGATTGAGATTTACAATGAGCAAGTCAGAGATCTATTGGTTACTGATGGAACAAACAAAAGATTAGAAATTCGTAGTAATTCAAACAAAGGGCTTAGCGTACCAGATGCAAGCCTGGTCCCAGTATCATCAGCAATAGATGTTATTGAACTAATGAACCTGGGGCAAAGGAACCGTACAGTTGGAGCAACAGCCATTAATGACCGTAGTAGCCGATCTCACACTTGTTTGACTGTTCATGTTCAAGGAAGAGACTTGACATCTGGAACTCTCTTACGTGGGTGCATGCATCTGGTGGACTTGGCAGGAAGCGAGAGGGTTGACAAATCTGAGGCCACAGGAGATAGACTAAAAGAGGCACAACACATTAACAAATCTCTTTCAGCTTTGGGTGATGTCATTGCTTCCCTTGCTCAGAGAAACCAACATGTTCCTTACAGAAATAGCAAACTCACGCAATTGCTCCAAGATTCACTTGGAGGACAGGCCAAGACACTTATGTTTGTTCACATAAGTCCAGAGGCTGATTCTATTGGAGAAACAATTAGCACCTTAAAATTTGCAGAAAGAGTTGCTACAGTTGAACTTGGAGCTGCAAGAGTAAACAAGGATGGTGCTGATGTAAAAGAGCTCAAAGAACAGATTGTTAGCCTTAAGGCAGAATTGGCAAGAACAGAAATAGAACCAGACCATTCCTCATCTGCCAGCTCTAGAAAATATAGGACGAAGAAGGCTAGTGAGCTATCACCTTATCATGCAAGCCAAAGAGGTGCAGACATTGCTGGTGATCTTGGGTGCCGGCAACCAATGGTTGATGTAGGCAACTTAGAGCTTCACAGTAATACCACGTTGAGGCAAAAGAGTCAAAGCTTTGATTTTGATGAGATTTCAGCAAATTCACCATCGTGGCCCCCAATTAAAAGTCCTGTACCAACATACAGGGAGGATGATAGAGAAACTGTATCAGGGGAGTGGGTTGATAAGGTGATGGTTAACAAGCTAGATGTAAACAAAACTGAGAGCATGCTAGAGTGTTGGGAAACAGATAATGGACACATATCTGATGTTTTTTATCAGAAATATCTCCAAGATTCTTCCGAAGTATACTCACAACAATCCTACAGTATGTTCTTGGCAGGCAACCAGTTTAATATTTCAGGGTCAGATAGCATGGATAATCTTGATGCTGCAACAAGTGATTCATCAGAACCTGACTTACTTTGGCAACTTAATCATTCCAAACTTACCACCTTAGCCGGTGAAAATGGATCAAAGGCTAGAAAACTTGTCTCAAAGTCAGCAAAAAGCCCAGAGTTGAGCAAGAATGGTATCAATTCTTCTCTTCGTCCTTCACCTTCAAGGAAACAAACAAATGGTGTATTACATAGAACAGGAAAGCATCCAGCTCCACTTGACATGAAATGCAAGACAGGGAGTGGGAGTAGAAAGTAA 3033 0.4105 MAALSFSLSSVVEDVLQQHSTRLKDLDLESRKAEEAAFRRYDAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVLNKVQPGAVPKVVETPVDSALIPDKGPLSAFQYFENVRNFLVAIQEIGIPTFEASDLEQGGKSARVVNSALALKSYSEWKQTGANGVWKFGGTIKPTTSTKTLERKNSEPFTNSLSRNSSMTEKSLAGFNSDVDSNKMSGSYSLSMLVRAILLDKKPEEVPQLVESVLNKVVEEFEHRIASQCEQTKVTSRAAASQSIGSISKFVTEDKKVQNKIPMVTKKEGFIHKKHVDDEETKGQLLRKQMLFDQQQRDIHELKHTIHTTKAGMQFMQTKFHEEFSNLGLHIHGLAHAASGYHRVLEENRKLYNQIQDLKGSIRVYCRVRPFLSGRPNFVNTVDSIEDGTITVNIPSKNGKGRRSFNFNKIFGPSSGQVEVFSDMQPLIRSVLDGFNVCIFAYGQTGSGKTYTMTGPKEITENSQGVNYRALSDLFLTADQRKETFHYDVSVQMIEIYNEQVRDLLVTDGTNKRLEIRSNSNKGLSVPDASLVPVSSAIDVIELMNLGQRNRTVGATAINDRSSRSHTCLTVHVQGRDLTSGTLLRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQRNQHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEADSIGETISTLKFAERVATVELGAARVNKDGADVKELKEQIVSLKAELARTEIEPDHSSSASSRKYRTKKASELSPYHASQRGADIAGDLGCRQPMVDVGNLELHSNTTLRQKSQSFDFDEISANSPSWPPIKSPVPTYREDDRETVSGEWVDKVMVNKLDVNKTESMLECWETDNGHISDVFYQKYLQDSSEVYSQQSYSMFLAGNQFNISGSDSMDNLDAATSDSSEPDLLWQLNHSKLTTLAGENGSKARKLVSKSAKSPELSKNGINSSLRPSPSRKQTNGVLHRTGKHPAPLDMKCKTGSGSRK* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0519 1010 Coils Coil 728 755 - -
Lan20g0519 1010 MobiDBLite consensus disorder prediction 962 986 - -
Lan20g0519 1010 Pfam Calponin homology (CH) domain 41 158 IPR001715 GO:0005515
Lan20g0519 1010 Gene3D - 24 191 IPR036872 -
Lan20g0519 1010 Gene3D Kinesin motor domain 391 762 IPR036961 -
Lan20g0519 1010 Pfam Kinesin motor domain 420 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan20g0519 1010 SMART ch_5 39 157 IPR001715 GO:0005515
Lan20g0519 1010 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 396 755 IPR027417 -
Lan20g0519 1010 PRINTS Kinesin heavy chain signature 469 490 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan20g0519 1010 PRINTS Kinesin heavy chain signature 591 608 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan20g0519 1010 PRINTS Kinesin heavy chain signature 622 640 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan20g0519 1010 PRINTS Kinesin heavy chain signature 671 692 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan20g0519 1010 ProSiteProfiles Kinesin motor domain profile. 396 721 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan20g0519 1010 SUPERFAMILY Calponin-homology domain, CH-domain 42 170 IPR036872 -
Lan20g0519 1010 SMART kinesin_4 394 729 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan20g0519 1010 Coils Coil 16 36 - -
Lan20g0519 1010 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 2 1005 - -
Lan20g0519 1010 ProSiteProfiles Calponin homology (CH) domain profile. 37 159 IPR001715 GO:0005515
Lan20g0519 1010 MobiDBLite consensus disorder prediction 753 773 - -
Lan20g0519 1010 CDD KISc_C_terminal 394 723 - -
Lan20g0519 1010 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 1005 - -
Lan20g0519 1010 MobiDBLite consensus disorder prediction 949 1010 - -
Lan20g0519 1010 MobiDBLite consensus disorder prediction 822 841 - -
Lan20g0519 1010 MobiDBLite consensus disorder prediction 753 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0519 Lan-Chr20 3850972 3857131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0519 384 721 Calmodulin-binding Proteins AT5G65930 42.442 1.65e-77 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0519 K10406 - gmx:100801279 1650.18