Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0512 ATGCACTTCAACCACATCCTTACCAACTCTTTCATCCAAAAACCAATGGCTTTCATGCACTTCTTGGTTTATACATTCTTTGTTTCCTATCTGCTTTGCTTCTTTGTCTTGACATCATTGTCCATTACAGATAACCATGAAACCATTTGTGGCTCCACTATAGACCCTAATTATTGTAAAAATGTGCTTGCTAATCAAAATGGCAACATCTTTGATTATGGTCGCTTTTCTGTTCAAAAGTCCTTGACCCAGTCTCTTAAGTTCTTAAACTTAGTGAATTCATACCTTCAAAATAGCTCAGTTTTCTCTCAATACACAACCAATGCTCTTGAAGATTGCCAGTTCCTCGCTGAGCAAAATAATGAATACTTATCAAACACCTATAACATAATTAATCAAGTTAGCAATGTTCTTCCTACCTCTCAAGGTGAAGATTTTCAAACCATTCTAAGTGCTGTTTTGACTAACCAAGAAACTTGTTTAGTTGGCCTACAAAGCACAAGTTCTGATCCAATAGTGAAGAATGACTTGTCTTCATTACTTTCCGATGACACAAAACTACACAGTGTCTCACTTGCACTGTTTGTGAAGGGTTGGGTGCCGAGGAAGATAATCACACCATCATGGCAACACAATGGAGGAAATTTGGATTTTCATAATGGTCGTTTACCATTAAAGATGTCAAATCGAGCACGTGCTATATATGATTCCGCTAGGCATCATGGGAGAAAACTACTTCAAACGACAAATGACAGCAGCGTTGTGGTAATTGACATTGTAGTTGTAAGTCAAGATGGAAGTGGAAACTTCACCACTATCAACGATGCCATAGCTGCTGCTCCAAATAACATAAATTCTACTAGTGGATACTTCTTGATTTTTATCAACGCGGGTGTATATCAGGAGTATGTATCCATAAATAAAACTAAGACTTATTTGATGCTAATCGGAGAAGGAATCAATCAAACAATTATCACCGGTAATCACAATGTCGGCGATGGTAATTTTACCACATTCAACTCTCCAACATTTGCTGTGGTTGCTCAAGGATTTGTAGCAGTTAACATAACATTCCGCAACACGGCAGGACCAAGCAAGTTCCAAGCAGTTGCACTACGAAGTGGAGCAGACATGTCCAGTTTCTATAGTTGCAGCTTTGAAGGGTATCAAGACACATTATATACACATTCTTTGAGACAATTTTACCGTGAATGTGATATCTATGGCACAGTTGACTACATATTTGGAAATGCAGCAGTTGTTTTTCAAAATTGCAACATTTATTCTCGTCTACCCCTCAGTGGTCAATTCAATACTATCACAGCTCAAGGTAGAACAGACCCAAATCAAAACACAGGCACTTCTATACAGAATGCTACTATTAAAGCTGCTGCTGATTTGGCTCCAAACATTGGTACTGTTCAAACATATCTTGGGAGGCCATGGAAGGAATATTCAAGGACTGTTTTTATGCAGTCTTTTATGGATAGTTTGATAAATCCTGCTGGTTGGCATGAATGGAGTGGTGATTTTGCTTTGAGCACTTTGTATTATGCTGAGTATAATAATACAGGACCTGGCTCAAATACTACGAATCGTGTGACATGGTCTGGTTATCATATTATTAATGCTACTGATGCAGCCAACTTTACTGTCTCAAACTTCTTGGCTGGAGATAATTGGCTTCCACAAACTGGTCTTCCATACTTGAGTGGATTGATATAG 1725 0.3832 MHFNHILTNSFIQKPMAFMHFLVYTFFVSYLLCFFVLTSLSITDNHETICGSTIDPNYCKNVLANQNGNIFDYGRFSVQKSLTQSLKFLNLVNSYLQNSSVFSQYTTNALEDCQFLAEQNNEYLSNTYNIINQVSNVLPTSQGEDFQTILSAVLTNQETCLVGLQSTSSDPIVKNDLSSLLSDDTKLHSVSLALFVKGWVPRKIITPSWQHNGGNLDFHNGRLPLKMSNRARAIYDSARHHGRKLLQTTNDSSVVVIDIVVVSQDGSGNFTTINDAIAAAPNNINSTSGYFLIFINAGVYQEYVSINKTKTYLMLIGEGINQTIITGNHNVGDGNFTTFNSPTFAVVAQGFVAVNITFRNTAGPSKFQAVALRSGADMSSFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDYIFGNAAVVFQNCNIYSRLPLSGQFNTITAQGRTDPNQNTGTSIQNATIKAAADLAPNIGTVQTYLGRPWKEYSRTVFMQSFMDSLINPAGWHEWSGDFALSTLYYAEYNNTGPGSNTTNRVTWSGYHIINATDAANFTVSNFLAGDNWLPQTGLPYLSGLI* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0512 574 CDD PMEI-like_3 48 195 - -
Lan20g0512 574 SUPERFAMILY Pectin lyase-like 259 572 IPR011050 -
Lan20g0512 574 PANTHER PECTINESTERASE 32 572 - -
Lan20g0512 574 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 32 572 - -
Lan20g0512 574 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 48 195 IPR035513 -
Lan20g0512 574 Pfam Plant invertase/pectin methylesterase inhibitor 47 194 IPR006501 GO:0004857
Lan20g0512 574 SMART PMEI_2 41 194 IPR006501 GO:0004857
Lan20g0512 574 ProSitePatterns Pectinesterase signature 2. 407 416 IPR033131 -
Lan20g0512 574 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 197 IPR035513 -
Lan20g0512 574 Gene3D - 257 574 IPR012334 -
Lan20g0512 574 Pfam Pectinesterase 260 559 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0512 Lan-Chr20 3784916 3787075 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0512 16 574 Carbohydrate Esterase AT4G02330 56.522 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0512 K01051 - gmx:100786124 815.068