Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0511 ATGACAACAATGTCAACCATTCTCATTCTCCTTCTACCCTTATTTGTTACCCTAGTTTTAGGGGATACCCCTCCCACCACTACGGTCTCTACTGGAACCGTATGCAAATATACCCCTGACCCATCTTATTGCAAATCAGTGCTCCCTACTCAAAATGGCAATGTTTATGATTATGGCCGTTTCTCGGTTAAAAAATCCTTATCACAAGCCACTAAATTCTTGGACTTGGTTAACAAATATCTCCATAAAAGCTCAACTCTTTCAACCCCTGCAATTCGTGCACTCCAAGATTGTAAAACTCTTGCTGAGCTTAACCTTGATTTTCTTTCAAGTTCATTCCAAACTGTTAACAAAACAACTAGGTTTCTTCAAAGTTCTCAAGCTGATGATATTCAAACATTGCTTAGTGCCATTCTAACAAATCAACAAACATGCTCAGATGGTCTTCAATCCACTTCTTCAGCATGGAGCGTGAAAAATGGACTCTCTAGTCCAATTTCTAATGACACAAAGCTCTTCAGTGTCTCTCTTGCTCTTTTTACAAAAGGGTGGGTTCCTAGCCACAAAAACAAACCCTCTACTTTTCATCCAACAAGGAAACAACTTGGATTTCAAAATGGGCGTTTACCACTTAAGATGTCAAGTAGAACCCGTGCAATATACGAGTCAGTGAGCAATAGGAAACTTCTTCAGGCCACGGTGGATGAAGATGTTATGGTGTCAGACATAGTGGTTGTAAGTCAAGATGGAAGTGGAAACTTCACTACAATCAGTGATGCTATCGCTGCTGCACCAAATAAGTCTTTGTCTACAGATGGATACTTCTTGATCTATGTAACCGCTGGTGTTTATGATGAGAATGTTTCTATTGATAAGAAGAAGACTTATTTGATGATGGTTGGAGATGGTATCAACCAAACAATCATAACAGGCAATCGTAGTGTTATTGATGGATGGACAACTTTCAACTCAGCATCATTCGTTGTGGTTGGGCAAGGATTCGTGGGCGTAAACTTTACCGTTCGTAACACTGCCGGAGCAGTGAAACACCAAGCAGTAGCACTCAGAAATGGAGCAGATTTGTCTACATTTTATAGCTGCAGCTTTGAGGGTTACCAAGACACATTATACACACATTCCCTAAGACAATTCTACAGGGAATGTGACATATACGGAACCGTAGATTTCATATTTGGAAATGCTGCAGTTGTGTTCCAAAACTGCAACCTATACCCACGCCTTCCAATGAGTGGACAATTCAATGCTATCACTGCACAAGGAAGAACTGATCCAAACCAAAACACTGGCACTTCAATTCATAACTGCACCATAAAAGCAGCTGATGATTTAGCTGTGAACATTGGTTCGGTTAAAACATATCTTGGAAGGCCTTGGAAAGAGTATTCAAGAACAGTTTATATGCAAAGTTTCATAGACAATGTGGTTGATGTTACTGGATGGAATAAATGGGATGGTGATTTTGCTTTGAGCACATTATATTATGCAGAATATAACAATAGTGGACCAGGGTCTAGTACTGATAACAGGGTTACATGGCCAGGGTACCATGTGATTAATGCCACTGATGCTGTTAATTTCACTGTTACTAATTTTTTGCTTGGAGATGATTGGCTGCCCCAGACTGGAGTCACTTACACCAGTAACTTGGTATAG 1674 0.4014 MTTMSTILILLLPLFVTLVLGDTPPTTTVSTGTVCKYTPDPSYCKSVLPTQNGNVYDYGRFSVKKSLSQATKFLDLVNKYLHKSSTLSTPAIRALQDCKTLAELNLDFLSSSFQTVNKTTRFLQSSQADDIQTLLSAILTNQQTCSDGLQSTSSAWSVKNGLSSPISNDTKLFSVSLALFTKGWVPSHKNKPSTFHPTRKQLGFQNGRLPLKMSSRTRAIYESVSNRKLLQATVDEDVMVSDIVVVSQDGSGNFTTISDAIAAAPNKSLSTDGYFLIYVTAGVYDENVSIDKKKTYLMMVGDGINQTIITGNRSVIDGWTTFNSASFVVVGQGFVGVNFTVRNTAGAVKHQAVALRNGADLSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQNCNLYPRLPMSGQFNAITAQGRTDPNQNTGTSIHNCTIKAADDLAVNIGSVKTYLGRPWKEYSRTVYMQSFIDNVVDVTGWNKWDGDFALSTLYYAEYNNSGPGSSTDNRVTWPGYHVINATDAVNFTVTNFLLGDDWLPQTGVTYTSNLV* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0511 557 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 182 IPR035513 -
Lan20g0511 557 Gene3D - 238 556 IPR012334 -
Lan20g0511 557 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 181 IPR006501 GO:0004857
Lan20g0511 557 Pfam Plant invertase/pectin methylesterase inhibitor 33 179 IPR006501 GO:0004857
Lan20g0511 557 ProSitePatterns Pectinesterase signature 2. 390 399 IPR033131 -
Lan20g0511 557 PANTHER PECTINESTERASE 26 555 - -
Lan20g0511 557 SMART PMEI_2 26 179 IPR006501 GO:0004857
Lan20g0511 557 CDD PMEI-like_3 33 184 - -
Lan20g0511 557 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 7-RELATED 26 555 - -
Lan20g0511 557 Pfam Pectinesterase 244 542 IPR000070 GO:0030599|GO:0042545
Lan20g0511 557 SUPERFAMILY Pectin lyase-like 240 554 IPR011050 -
Lan20g0511 557 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 182 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0511 Lan-Chr20 3771353 3773628 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0511 1 557 Carbohydrate Esterase AT4G02330 63.240 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0511 K01051 - gmx:100800971 904.049