Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0502 ATGTCTCGTGTTGCAGTGAAGGGGAAGAAGAAGGGAGCGACCTTCGTTATTGAATGCGCCAAGCCTGTGGAAGATAAGATTATGGATATCGCTTCTCTCGAGAAGTTTCTTCAGGAGAGGATCAAAGTTGGAGGTAAAGCTGGCGCACTCGGCGATTCCGTCACCGTTACTCGTGACAAGACCAAGATCACCGTCACCTCCGATTCCAATTTCTCCAAACGCTATCTGAAATACTTGACAAAGAAGTACTTGAAGAAGCACAACGTTAGGGATTGGCTTCGTGTGATTGCCTCCAACAAGGACAGGAATGTCTATGAGTTGAGATACTTCAACATCGCAGAGAATGAGGCTGAAGAGGAAGACTAA 366 0.4645 MSRVAVKGKKKGATFVIECAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTRDKTKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEAEEED* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0502 121 PANTHER 60S RIBOSOMAL PROTEIN L22-2 4 121 - -
Lan20g0502 121 Gene3D - 2 121 IPR038526 -
Lan20g0502 121 Pfam Ribosomal L22e protein family 11 119 IPR002671 GO:0003735|GO:0005840|GO:0006412
Lan20g0502 121 PANTHER 60S RIBOSOMAL PROTEIN L22 4 121 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0502 Lan-Chr20 3709608 3711353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0502 1 121 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 82.258 2.36e-62 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0502 K02891 - cit:102631252 212.231