Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0481 ATGGCGATTACTAAAGGCCCAGGTTCCATTGGTGTTCATGGATGGGGAGACATGAAGAGTCTCTCCGTCCATGCCATCACCGGCCGGTGGTTTGTGGTGTTCGCCTCCTTCTTCATCATGGCAGCTGCCGGAGCCACCTATATGTTTGGCCTATACTCCCAAGATATAAAACAAACTCTTGGCTATGATCAAAGTACCCTCAATCTCCTTAGTTTCTTCAAAGACTTTGGAAGCAATGTTGGAGTTCTCTCTGGCCTAATCAATGAGATAACACCACCTTGGGTAGTGTTAGCAATTGGTGCTGTAATGAACTTTGTTGGTTACTTCATGATATGGCTTTCAGTGACTGAAAAAGTAGCAAAACCTCAAGTGTGGCTCATGTGTCTCTATATCTGCATAGGTGCAAATTCTCAATCTTTTGCCAATACTGGTTCACTTGTTACTTGTGTCAAGAACTTCCCTGAAAGCCGTGGCGCTGTGTTAGGAATTCTTAAAGGCTATGTTGGTCTTAGTGGTGCAATCATCACACAACTATATTCAGCTATTTACTATAATGACTCCAAAGGTTTGATTTTGTTCATTGGTTGGCTTCCTGCTGCTATATCCTTTGTTTTCCTTCGAACCATTCGGTACATGAAGCCGGTTCGGCAACCTAATGAGGTGAAAGTTTTCTACAATTTTTTGTATATTTCGCTTGGTCTTGCTGGGTTTCTACTTGTTATGATTATAATACAGAAAGAAGTTCACTTCAGTCAGAGTGAGTTTGGTGTAAGTGCTGCTATTGTGGTTTTCTTACTCTTCCTCCCAGTTGCTGTTGTTTTTATTGAAGAATATAAAACCTGGCAGAGTAAAAAGTTTGCATTGGTTGATCCCTCACCAGTGAAAATAGTTACTGAAAAGGTCAACCCAGATGAGGGTGTTAATCAAGGTTTTAAATCTAGGTCTGTTTCAGAACCAAAGGTGAATGAAACAGTTTCCACCAAAGACACAAGATGGTCGGAAAATGTGTTTAGTCCACCAGATAGAGGTGAGGACTATACAATTCTTCAAGCACTATTTAGCATAGACATGTTAATGTTATTCATAGCTTGTATTTGTGGTGTTGGAGGAACTTTAACTGCAATTGACAATCTTGGTCAGATTGGAGCCTCACTTAAATACCCAAAGAGAAGCATAAGCACTTTTGTGTCACTAGTGAGCATTTGGAATTACCTAGGACGTGTTTTTTCTGGGTTTGTTTCTGAATATTTTCTAACAAAGTACAGATTTCCTCGTCCTCTTATGCTCACTTTCACTCTCCTCTTATCATGTGTTGGTCACCTTCTCATAGCTTTTGATGTGAAAGATGGTCTCTATGTGGCTTCAGTGATTATAGGTTTTGGTTTTGGTGCACAATGGCCATTACTTTTTGCCATAATATCTGAACTATTTGGACTTAAATACTATGCAACTTTGTACAACTTTGGAAGTGTAGCGAGTCCACTTGGGTTATATGTGCTTAATGTCAAGATCACCGGTCATTTGTATGACAAAGAAGCTAGGAAACAATTGGAAGCATTGGGAATACAAAGAAAAGAAGGGCAAGAATTGAATTGTGTTGGGGAAAGTTGTTTCAAATTATCCTTCATTATCATCACAGCTGCAACATTATTTGGTGCCATTGTTTCACTCATTTTGGTTGCTAGGACAAGAAAGTTTTACAAAGGTGACATATACAAGAGGTTCAGGGAAGATGTTAAAGTGGCAGAAGCTGAAATGGCAGTGGTGGAGAACTGA 1776 0.3981 MAITKGPGSIGVHGWGDMKSLSVHAITGRWFVVFASFFIMAAAGATYMFGLYSQDIKQTLGYDQSTLNLLSFFKDFGSNVGVLSGLINEITPPWVVLAIGAVMNFVGYFMIWLSVTEKVAKPQVWLMCLYICIGANSQSFANTGSLVTCVKNFPESRGAVLGILKGYVGLSGAIITQLYSAIYYNDSKGLILFIGWLPAAISFVFLRTIRYMKPVRQPNEVKVFYNFLYISLGLAGFLLVMIIIQKEVHFSQSEFGVSAAIVVFLLFLPVAVVFIEEYKTWQSKKFALVDPSPVKIVTEKVNPDEGVNQGFKSRSVSEPKVNETVSTKDTRWSENVFSPPDRGEDYTILQALFSIDMLMLFIACICGVGGTLTAIDNLGQIGASLKYPKRSISTFVSLVSIWNYLGRVFSGFVSEYFLTKYRFPRPLMLTFTLLLSCVGHLLIAFDVKDGLYVASVIIGFGFGAQWPLLFAIISELFGLKYYATLYNFGSVASPLGLYVLNVKITGHLYDKEARKQLEALGIQRKEGQELNCVGESCFKLSFIIITAATLFGAIVSLILVARTRKFYKGDIYKRFREDVKVAEAEMAVVEN* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0481 591 SUPERFAMILY MFS general substrate transporter 30 566 IPR036259 -
Lan20g0481 591 CDD MFS_Mch1p_like 28 553 - -
Lan20g0481 591 PANTHER MFS TRANSPORTER 12 591 - -
Lan20g0481 591 Pfam Nodulin-like 29 274 IPR010658 -
Lan20g0481 591 Gene3D MFS general substrate transporter like domains 26 222 IPR036259 -
Lan20g0481 591 Gene3D MFS general substrate transporter like domains 347 568 IPR036259 -
Lan20g0481 591 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0481 Lan-Chr20 3527719 3529796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0481 16 577 Nodulin-like Gene Family AT2G39210 72.291 0.0 825
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0481 - - pvu:PHAVU_007G024800g 936.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0481 20 3527719 3529796 Lan4g1422 4 23242784 23244646 LSH