Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0475 ATGGCTCATGATTCACGTCGCAATCATCACCGATCGTCTTCTCCCGATAACGTCGACAAATCCTCCAAACGCCACAAGCACCGTCACCACTCACATCGTCACCATCACAGCAAAAAACGCGATGAAAAAATTGAAAACGATGTCGAAACATATGTCGTTGTTCCGTCTCCAATTCCCGATCGATATAACCGTCTCACTAATGATGATGTAGAGGAGGGAGAGATTCTTGAAGAGGATGACGATGTTACAAGAAAGCACTCGGAATCTGAGGCCGAACCTGGTGAAATCGAGGTGATTGGAGATCGAGATTCTCGATCTGATAAGAAAAATCTGGGACTTTTGACTAAAAATTCAAAAACTAGAAGTGAAGACATTGACAGTGATAATGTTATTAGTCATGAAGATAATGGTTCTCCTAATCGTTCAACCACTGGGCCTCAAGATGGGAAGGATGCCAGATCTAGATCAGATGGTGCAGGCAATGGGTATTTGGATCCTAAATCTTCCAAAGGGGATAACTGGCAGAACAGGGAACTTGGAAGTCTTAAAGGAAATGAGAAACTAAAAGATAACTACTATGATGAAGCAATTGGGGCTAATGGGGGAAAAGTCAATAACCGCTGGAATTCGTCCTCAGAAAGTGGAGAAGAGAAGTATAAAATGGCTGGAAATTCTCCTCATGATAGATACAGAAGTCGATCAAGATCAATTGGTCATAATAGGGAAAGGTCGCGATCTCAAAGTATAGTAGATGAACATGCTCATTCTAAGAGAAGGCACTCTGGGGAACAAGGGACCCACGATTATATCAACAGAGATAAGACTGACTATGATGAAGAAAGAATGAAGCCATGCCGAAAGGAGCATCGTCATCACAGTATAGATTTGGTGGTAGATGATAGAAGGGAATACATCACTAAATATCACAGTCGGGAAGCCCGGGATAGGGATAGAAGTAGGGACATGGGTGTGGATAGAGATTTAGGCAGGGAAAATAAAAGAGCGGAAAGAAGCAGGAATAGGGAGGTTGATTGGCTGCGTCGAACAGAGAAAGAGCGTGGAAGGAGCAAGGAGAGGGGTAGAAGGGATGTGGAAGAAGTTCAGATCAGGGAAAGGGAGAAGGCTAGGGATAGGAGAGGAGAAAAGGACATAGAAAGGAGCTGGGAGGCAGTGTATGGGAGGGACAGGACAAGGGGAAATGAAAGAGATAGGAGTGCAGATAGAAGACGGGGTGGTGAGAGAGAAAGAGAGTGGGAGAGTGAAAGAGGTGATATAAATCGGGAATGGTATAATATTAGGGAGCGAGAGAGGCAATATGATAGATATAGGCACAGGAGTAGAGACAATGCCAATGGTAAGGGTAAGGATCTGCATCATGAGGATGGTAATGACAATCGAGATAGATATAGAAAACATTCAAGATATGAAGAAACTGAATACCATCAGGAGAGAAAAAGAAATTCCGATCCTGTAGAGGCTTTTAAATCTACGGGAAGGACCATGGAAGAGGATGAGTGCAAAAAACTAGAAAGAGGTGAGATTGAAGATGACATAGATGAGGATGCATTCCAATTACCTGAACAAGAAGAAGATCTCAACAAAATTAAAGAGGAGAGTAGGAGGAGAAGAGAAGCCATAATGGAGAAATACAGGAAGCAGCATCAGCAAGTTGAACAAGGGATTGAAAATGAAGGGAAAGATACGGAACCTATGGACATTACTGAAGCACTTGATGGTAAGAATGACGCTGATGATTCAGAAACATCATTTGCTGTTGGGAAATCTCCTGAAAATTCGAAAGTTGCTTCTGAAAAAATATATGGTGCTCGGGGTCTGGGAGAGGGCACTCCAAAGAGCGAGAGATCAGATGACAAATTTTGTGATGATATATTTGGTGAGACACCAACTGGAGTTCGGAAATCTGGGAAAGGAGATAGTTTACTGATTGAGAAGGTTGGACTCCATGACAATTGGGACGATGCAGAGGGCTATTACAGCTATCGTTTTGGTGAAATACTTGATGGCCGGTATGAAATCACCGCTGCACATGGGAAGGGTGTCTTTTCAACAGTTGTTCAGGCAAAGAATCTTAAAACTGGTAATGGAGAACCAGAAGAAGTAGCTATAAAAATTATTCGCAATAATGACACCATGTACAAGGCTGGTATGGATGAGTCAACCATATTGAAGAAATTAGTAGGTGCAGATCCGGACGATAAGCGTCATTGTGTTCGTTTCCTTTCAAGTTTTAAGTACAGGAATCACCTTTGTTTAGTTTTTGAATCTCTTAATATGAATCTTCGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAAGCGCTGTGAGAGCATATGCAAAACAACTATTTATTGCACTGAAGCATCTCCGGAACTGTGGTGTTATCCATTGTGATATAAAGCCAGATAATATGTTGGTGAACAAGGCTAAAAATGTGTTGAAGCTTTGTGACTTTGGTAATGCCATGTTTGCTGGTAAGAATGAAGTTACACCATATCTTGTGAGTCGCTTTTATCGTGCCCCGGAAATAATACTTGGCTTGCTGTATGATCACCCATTGGATATCTGGTCTGTTGGCTGTTGTTTGTATGAAATTTATACAGGGAAAGTTCTTTTTCCAGGGCTTACAAACAATGACATGTTACGGCTTCACATGGAATTGAAGGGTCCTTTTCCGAAGAAAATGCTACGCAAGGGTGCGTTTATTGAACAACATTTTGACCATGACTTGAATTTTCTGGCTACAGAGGAGGATCCTGTAACACAAAAGACCATAAAGCGGATGATTCTCAACATAAAGCCAAAAGATATTGGAACAATCATCAGTGGTTCCCCTGGGGAGGATCCAAAAATGTTAGCCAATTTCAAGGATCTTCTGGAGAAGATTTTTGTCTTGGATCCAGACAAGAGGTTGACAGTCTCACAAGCACTGAACCACCCATTCATCACTGGAGGCCTATCACTGGTTTGA 3000 0.4203 MAHDSRRNHHRSSSPDNVDKSSKRHKHRHHSHRHHHSKKRDEKIENDVETYVVVPSPIPDRYNRLTNDDVEEGEILEEDDDVTRKHSESEAEPGEIEVIGDRDSRSDKKNLGLLTKNSKTRSEDIDSDNVISHEDNGSPNRSTTGPQDGKDARSRSDGAGNGYLDPKSSKGDNWQNRELGSLKGNEKLKDNYYDEAIGANGGKVNNRWNSSSESGEEKYKMAGNSPHDRYRSRSRSIGHNRERSRSQSIVDEHAHSKRRHSGEQGTHDYINRDKTDYDEERMKPCRKEHRHHSIDLVVDDRREYITKYHSREARDRDRSRDMGVDRDLGRENKRAERSRNREVDWLRRTEKERGRSKERGRRDVEEVQIREREKARDRRGEKDIERSWEAVYGRDRTRGNERDRSADRRRGGEREREWESERGDINREWYNIRERERQYDRYRHRSRDNANGKGKDLHHEDGNDNRDRYRKHSRYEETEYHQERKRNSDPVEAFKSTGRTMEEDECKKLERGEIEDDIDEDAFQLPEQEEDLNKIKEESRRRREAIMEKYRKQHQQVEQGIENEGKDTEPMDITEALDGKNDADDSETSFAVGKSPENSKVASEKIYGARGLGEGTPKSERSDDKFCDDIFGETPTGVRKSGKGDSLLIEKVGLHDNWDDAEGYYSYRFGEILDGRYEITAAHGKGVFSTVVQAKNLKTGNGEPEEVAIKIIRNNDTMYKAGMDESTILKKLVGADPDDKRHCVRFLSSFKYRNHLCLVFESLNMNLREVLKKFGRNIGLRLSAVRAYAKQLFIALKHLRNCGVIHCDIKPDNMLVNKAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLLYDHPLDIWSVGCCLYEIYTGKVLFPGLTNNDMLRLHMELKGPFPKKMLRKGAFIEQHFDHDLNFLATEEDPVTQKTIKRMILNIKPKDIGTIISGSPGEDPKMLANFKDLLEKIFVLDPDKRLTVSQALNHPFITGGLSLV* 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0475 999 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 351 993 - -
Lan20g0475 999 MobiDBLite consensus disorder prediction 22 39 - -
Lan20g0475 999 ProSitePatterns Serine/Threonine protein kinases active-site signature. 804 816 IPR008271 GO:0004672|GO:0006468
Lan20g0475 999 ProSiteProfiles Protein kinase domain profile. 677 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0475 999 MobiDBLite consensus disorder prediction 440 514 - -
Lan20g0475 999 MobiDBLite consensus disorder prediction 440 524 - -
Lan20g0475 999 CDD STKc_PRP4 676 992 IPR044092 GO:0004674|GO:0006468|GO:0045292
Lan20g0475 999 PANTHER DUAL SPECIFICITY PROTEIN KINASE 351 993 - -
Lan20g0475 999 SMART serkin_6 677 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0475 999 SUPERFAMILY Protein kinase-like (PK-like) 664 994 IPR011009 -
Lan20g0475 999 MobiDBLite consensus disorder prediction 1 292 - -
Lan20g0475 999 MobiDBLite consensus disorder prediction 132 147 - -
Lan20g0475 999 MobiDBLite consensus disorder prediction 1 21 - -
Lan20g0475 999 MobiDBLite consensus disorder prediction 203 218 - -
Lan20g0475 999 MobiDBLite consensus disorder prediction 220 292 - -
Lan20g0475 999 MobiDBLite consensus disorder prediction 79 131 - -
Lan20g0475 999 Gene3D Phosphorylase Kinase; domain 1 647 736 - -
Lan20g0475 999 Pfam Protein kinase domain 681 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0475 999 Gene3D Transferase(Phosphotransferase) domain 1 737 993 - -
Lan20g0475 999 MobiDBLite consensus disorder prediction 307 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0475 Lan-Chr20 3467686 3475058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0475 630 994 MAP Kinase Gene Family AT2G18170 30.184 1.62e-27 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lan20g0475 Pkinase 7.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0475 K08827 - gmx:100784523 1340.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0448 8 6677888 6688334 Lan20g0475 20 3467686 3475058 LSH