Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0458 ATGAAATTCAAATTAGAAAAACATTTGCTATTCAACCCAAACCCAAATATTTGTGATTCCTTAAACCCACTCCTCCCACTGAAGCCTTTTTTCACAACCACGTTTCTCTCTGTTACCCCTTACATTACAGCTATCACTCCCATACACATTTTTTTTTCTTCCAATTTTTTTCCTATGAGACTTTCTATTTTCTCTCCCCACACTCACCATTGTCACCAAAACCCTATCAAACTAAACCATTCTCCCTTCACACTTTTCACTCATTCTTCTTCTTCTTCTTCCCCTCCAACCAGATTACGGTTGCCAAGAATGCACGCCGCCGCTGCCACCACATTCTACCACCACCGCCGGAAAGACAAGGTGGTGGTCATAATGGGCGCCACGGGCTCAGGAAAATCGCGACTTTCCGTCGACCTCGCCACCCTCTTCTTCCCTTTCTCCGAAATCCTCAACTCTGATAAAATGCAAGTTTATTCCGGTCTCGACATCACCACCAACAAGATCCCCCTCCACCAGCGCCGCGGGGTCACCCACCACCTCCTCGGCGATGTCGACCCCGACGCCGGTGAGTTTTCACCCTCCGACTTTCGCCACCGCGCCGGCGACATCATCTCCGATATCAACAATAGAAGAAAACTCCCCATAATAGTTGGTGGTTCCAACTCCTTCATCCATGCTCTTCTAGTAGAACGATTCGACCCTGAGTTGAACGTGTTTGGCACTGAGTTATCGTCATCACCTGTTATTTCTTCAGAGTTGAGATATAACTGTTGCTTCCTATGGGTAGATGTGTCATTTCCTGTGTTATCAGAATATTTGATAAAACGAGTCGATGACATGCTTGACTCGGGAATGGTAGACGAGTTGGCTCAGTTTTTTGACCCAGACGCGACAGAAGAAATGAACCGAACCGGGTTGAGAAAAGCGATAGGGGTGCCAGAGTTGGACCAGTATTTTAAAGGGTACCCACCCGGTTCAGGGGAGGAAGGGGATCGGGTACGGAAGGGTGCATACAAGGAAGCGGTGAGGGCGATTAAGGATAACACGTGTCAGCTAGCGAAGAGACAGATAGAGAAGATTTTAAGGCTGAAAAGGGCGGGGTGGGACCTACAGAGGATTGACGCCACCGACGCGTTTAGGGCGGCGCTGACGTCAGACGATAGGTGGTCCGATATATGGGAGAGGCAGGTGTTGGAACCAAGCGTCAAGATTGTGAACCGTTTTTTGATGGATTAG 1236 0.4846 MKFKLEKHLLFNPNPNICDSLNPLLPLKPFFTTTFLSVTPYITAITPIHIFFSSNFFPMRLSIFSPHTHHCHQNPIKLNHSPFTLFTHSSSSSSPPTRLRLPRMHAAAATTFYHHRRKDKVVVIMGATGSGKSRLSVDLATLFFPFSEILNSDKMQVYSGLDITTNKIPLHQRRGVTHHLLGDVDPDAGEFSPSDFRHRAGDIISDINNRRKLPIIVGGSNSFIHALLVERFDPELNVFGTELSSSPVISSELRYNCCFLWVDVSFPVLSEYLIKRVDDMLDSGMVDELAQFFDPDATEEMNRTGLRKAIGVPELDQYFKGYPPGSGEEGDRVRKGAYKEAVRAIKDNTCQLAKRQIEKILRLKRAGWDLQRIDATDAFRAALTSDDRWSDIWERQVLEPSVKIVNRFLMD* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0458 411 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 4-RELATED 110 409 - -
Lan20g0458 411 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 266 370 - -
Lan20g0458 411 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 299 IPR027417 -
Lan20g0458 411 Pfam IPP transferase 252 357 - -
Lan20g0458 411 Pfam IPP transferase 156 230 - -
Lan20g0458 411 Gene3D - 118 409 IPR027417 -
Lan20g0458 411 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 110 409 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0458 Lan-Chr20 3277918 3280004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0458 254 409 C2H2 Transcription Factor Family AT2G27760 28.889 1.60e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0458 K10760 - gmx:100813761 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0462 8 6905665 6907047 Lan20g0458 20 3277918 3280004 LSH