Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0450 ATGGCGGCGATACCCTCTCACCTCATTGCTACCATTCTCTACATCACATTCCTCTCTCATCTCCTTCTCATTGTTCAAACTTCACCAACCCCAGATTTGGACGCTCTCATTTCCTTTAAAACCGCTTCAGATACTTCCAAAAAACTCACAACATGGAACACTACCACCAACCCATGCACCTGGTACGGCGTTTCCTGCATCAACAACCGTGTCTCACGACTCGTTCTCGAAAATCTCGACCTCCAAGGTTCCGTCCTCCCCTTAACTTCTCTCACTCACCTTCGAGTTCTAAGCCTCAAACATAACCGTTTCACTGGCCCCGTTCCTTCTCTCTCTAACTTCACTGCTCTCAAGCTTCTCTTTCTCTCTCATAACACCTTCGATGGTAACTTCCCTTCTACGGTTACCTCGCTTTTCCGTTTGTACCGTCTTGATCTGTCTTACAATCACTTCGCCGGCGATATTCCGGTGACGGTTGAACGTTTGACAAAGCTTCTCACTCTCCGTCTCGAAAACAACCAGTTCTCCGGTCACATTCCCGGTGTTAGCATTCCCAGCTTACAAGACTTCAACGTCTCCGGTAATCATCTCTCCGGCGAGATACCGGAGTCCTTTTCCGGTTTCCCTGAATCTTCTTTCCGGAAAAACCCGTCTCTCTGCGGAGCCCCGGTTCAGAAATGCAATGACGTCATAGCTGACCCGAGTAAACCCAAATCAGAAGGTGTCATTGCTGCTTCACCGGTTATGCCAATGCCACGTGATAAAACCCCAACAACAACAGTGTCTTCTTCTCTCCCATCCAACGAAGAAGGACCAAGTAGCAAAAAAACTCATAAAAACGGTAATGGGGGTTCCAAAATAAGCCCGGTGGGTTTAATAGCAATTATAGTTGGTGACGTTTTAGTCCTCGGCATTGCGTGTTTACTCCTCTATTGCTACTTCTGGAGGAGCTACTCTAAAAAATTGAAAGAAGGGAAAGGGTCTAAGCTATTCGAGAGCGAAAAGATTGTTTATTCATCGAGTCCTTACCCTGCACAAGCGGGGTTTGAGAGGGGTAGAATGGTGTTCTTTGAAGGGGAGAAGAGGTTTGAACTTGAGGACTTGCTTCGGGCCTCGGCTGAGATGCTTGGGAAAGGTGGGTTTGGGACTGCGTATAAAGCTGTTCTTGATGATGAGAATGTGGTTGCTGTGAAGAGGTTGAAGGATGCTCAGATTGGAGGGAAGAGAGAGTTTGAACAGCATATGGAAGTGATTGGAAGGTTGAGGCATCCTAATATTGTTAGTTTGAGGGCTTATTATTTTGCTAGAGAGGAAAAGTTGTTGATTTATGATTTCATGCCAAATGCTACACTGTTCTGGCTCCTTCATGGGAACCGGGGACCCGGTCGAACCCCACTGGACTGGACCACAAGGCTCAAGATAGCAGCAGGAGCAGCACGAGGTGTGGCTTTTATTCACAACTCATGCAAGTCACTTAGGCTAACCCATGGTAACATCAAGTCCACCAACATTCTCCTTGACAAGCAGGGTAATGCATGTGTATCAGATTTCGGACTCTCCATCTTTGCAGTCCCTGGCTGCAGATCAAATGGTTACCATGCCCCGGAGGCAATTGCATTAGACGGTAGAAAACAATCTCAGAAATCCGACGTGTATTCTTTTGGTGTTGTTCTTTTAGAGCTTTTGACCGGGAAGTGCCCCTCTTCTGCGGTGGATAGTAACAGTGGGAGTGGGACTATTGATCTTCCTAGATGGGTCCAGTCAGTGGTGAGGGAAGAATGGACGGCTGAGGTGTTTGATATTGAGCTGATGAGGTATAAGGATATTGAGGAGGAGATGGTGGGTTTGTTGCAGATTGCTATGGCTTGTACTGCAGCTGCACCTGATCAACGCCCGAGGATGTCCCATGTGGCCAAGATGATAGAGGAGTTGCGTGGGGTCGAGGTGTCGCCATGTCATGACACGTTGGACTCAGTCTCTGAGTCACCTTCCTTGTCTGAAGATGCATGTGGAGCTAGTCAGTAA 2025 0.4765 MAAIPSHLIATILYITFLSHLLLIVQTSPTPDLDALISFKTASDTSKKLTTWNTTTNPCTWYGVSCINNRVSRLVLENLDLQGSVLPLTSLTHLRVLSLKHNRFTGPVPSLSNFTALKLLFLSHNTFDGNFPSTVTSLFRLYRLDLSYNHFAGDIPVTVERLTKLLTLRLENNQFSGHIPGVSIPSLQDFNVSGNHLSGEIPESFSGFPESSFRKNPSLCGAPVQKCNDVIADPSKPKSEGVIAASPVMPMPRDKTPTTTVSSSLPSNEEGPSSKKTHKNGNGGSKISPVGLIAIIVGDVLVLGIACLLLYCYFWRSYSKKLKEGKGSKLFESEKIVYSSSPYPAQAGFERGRMVFFEGEKRFELEDLLRASAEMLGKGGFGTAYKAVLDDENVVAVKRLKDAQIGGKREFEQHMEVIGRLRHPNIVSLRAYYFAREEKLLIYDFMPNATLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGVAFIHNSCKSLRLTHGNIKSTNILLDKQGNACVSDFGLSIFAVPGCRSNGYHAPEAIALDGRKQSQKSDVYSFGVVLLELLTGKCPSSAVDSNSGSGTIDLPRWVQSVVREEWTAEVFDIELMRYKDIEEEMVGLLQIAMACTAAAPDQRPRMSHVAKMIEELRGVEVSPCHDTLDSVSESPSLSEDACGASQ* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0450 674 PANTHER - 25 660 - -
Lan20g0450 674 Gene3D Transferase(Phosphotransferase) domain 1 446 657 - -
Lan20g0450 674 MobiDBLite consensus disorder prediction 235 282 - -
Lan20g0450 674 SUPERFAMILY Protein kinase-like (PK-like) 374 641 IPR011009 -
Lan20g0450 674 Pfam Leucine rich repeat N-terminal domain 31 66 IPR013210 -
Lan20g0450 674 Gene3D Ribonuclease Inhibitor 88 232 IPR032675 -
Lan20g0450 674 Gene3D Ribonuclease Inhibitor 26 87 IPR032675 -
Lan20g0450 674 ProSitePatterns Protein kinases ATP-binding region signature. 376 398 IPR017441 GO:0005524
Lan20g0450 674 MobiDBLite consensus disorder prediction 653 674 - -
Lan20g0450 674 MobiDBLite consensus disorder prediction 253 282 - -
Lan20g0450 674 ProSiteProfiles Protein kinase domain profile. 370 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0450 674 Pfam Protein kinase domain 374 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0450 674 SUPERFAMILY L domain-like 49 215 - -
Lan20g0450 674 CDD STKc_IRAK 376 644 - -
Lan20g0450 674 MobiDBLite consensus disorder prediction 655 674 - -
Lan20g0450 674 Gene3D Phosphorylase Kinase; domain 1 349 445 - -
Lan20g0450 674 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 25 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0450 Lan-Chr20 3168404 3171370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0450 32 673 Receptor kinase-like Gene Family AT1G68400 64.177 0.0 814
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan20g0450 Pkinase 1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0450 - - adu:107467433 1001.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0450 20 3168404 3171370 Lan4g1448 4 23623663 23626999 LSH