Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0448 ATGACTTATGTTTATGTAATCCATTTCCTTTTGTTTTCACATCTTATGTTATCTCTCTTGGCTGCTGGAGTTGAAAATGGAAATGGAAACATAGGAAAGTGTCCAACTTCATTTCAGTGTGGACATCTTGGCAATATCACATTCCCTTTCACTGTAACACAACACCCTCACTGTGGCTTATTTGTCATACACAATTGTGATACTGTTGATCCTATGAAGCCCAAAAAAATCCAACTAGAGAATAAAGGGAAATGGTTTTGTATTATAAGACTTCTTCACAATCCTAGTATTCCTGCTACAACCACACTTCAAATCAGAGACACAAATCTCTATGATCTGCTTGAATCAAGAAGTTGTGAATCCTTTAGCCATAATTATACTCTCCCTCCTTCCTTTCCTTTTGGTTCTATTCATATACAATATAAGCAAACCTTGTTCAAGTGCAACCGCACCCTCCGTGTTAACCCGCCATTAGATGTGCATAATTATACAAATTGCTCTGATTTTGATCTCTACTACAAGCCATCACTTACTCCTTCTGACAAGTCTTTGAGTTCTTTGGCAGCATGTATAATGATCAAACTTCCTATTAAAGATGTGGCTGATGCTAAAGACCCGTTTACATTCATAACATCTAATATCATGACAGAAGTAAAATTAACAGATGAATGTGCAAATTGCTACTATGTCAAAAGAGGGCAGTGTCATTTTGACAGCAGACAGAAATTCTTTTGCATCAATGGTATACTGAAACAAATACCATGGAAACCTAAAAAGAGTTGGAGTTCAAAATTGGCTATAGGTTTAGGTGCAGGAATCATAGGCATCTTCATAACTGGGTTGCCATTAATCCTTATCCTCTACAAACGGAAACATGCTACTTCAGACAAACGCTTCCATTCAAGAAATTCTTATGCTGGTTCCTCCACAAATCTACACCTAGAAAGCAGTGGTGTATACTTCGAAGTTCCAATCTTCTCCTACAAGGATCTTAAAGAAGCAACAAACAATTTCGACCATACTAAAGAACTTGGAGATGGAGGCTTCGGGACTGTATACCATGGGAAACTACAAGATGGAAGGGAAGTTGCTATCAAACGCTTATATCAGCACAATTATAGGCGAGTAGAGCAGTTCATGAATGAAGTTAAGATCCTCGCACGCTTGCGCCACACGAATCTAGTCTCCCTCTATGGCTGCACTTCAAAGCACAGCCTCGAACTACTACTTGTGTATGAATATATTTCAAATGGCACCATTGCATCCCATCTCCATGGTGAATTAGCCAAGCCTGGCTTACTACCATGGTGTATAAGAATGAAAATTGCAATAGAGACTGCAACTGCATTGACATATCTGCATGCTTCTGATATCATTCACCGTGATGTGAAAACAAACAACATTCTCCTTACCAAAAATTTCTGTGTTAAAGTTGCTGATTTTGGCCTTTCAAGACTATTCCCTACGGATGTAACTCATGTCTCCACAGCTCCACAGGGGACCCCGGGTTATGTTGACCCGGAATATCACCAATGCTATAAGCTTAGTAGTAAGAGTGATGTATATAGTTTTGGAGTTGTTCTCATTGAGCTAATATCTTCAAAGCCTGCTGTTGATATAAACAGGAATAAGGAAGAGATTAACTTGTCCAATCTAGCCATAAAGAAGATTCAACATAGTGCAATAAATGAGCTGGTAGATCCCTGTCTTGGTTTTGATTCAGATAATGAGGTCAAGAAGAGTATAGTTTCTGTGGCAGAGTTGGCTTTTCAATGTTTGCAAATGGACAAGGAATTGAGACCTTCCATGGATGAAGTATTGGATGAACTGAGAAAAATTGAAAGTGGAAAGGATGAAGCAGAGGTTGTTGAGGAAGCAGATACTCATGTTGCTGGAGTTTCACATAGTAATGTACATACACGCAACTCACCTGAATGGGACGAAGTTGGATTATTGAAGAATATGAATCAGCCTTCTTCACCAAACACTGTCACTGATATATGGGAAAGTAAATGTACTACACCTAATTTCAGTGCTTAA 2040 0.3868 MTYVYVIHFLLFSHLMLSLLAAGVENGNGNIGKCPTSFQCGHLGNITFPFTVTQHPHCGLFVIHNCDTVDPMKPKKIQLENKGKWFCIIRLLHNPSIPATTTLQIRDTNLYDLLESRSCESFSHNYTLPPSFPFGSIHIQYKQTLFKCNRTLRVNPPLDVHNYTNCSDFDLYYKPSLTPSDKSLSSLAACIMIKLPIKDVADAKDPFTFITSNIMTEVKLTDECANCYYVKRGQCHFDSRQKFFCINGILKQIPWKPKKSWSSKLAIGLGAGIIGIFITGLPLILILYKRKHATSDKRFHSRNSYAGSSTNLHLESSGVYFEVPIFSYKDLKEATNNFDHTKELGDGGFGTVYHGKLQDGREVAIKRLYQHNYRRVEQFMNEVKILARLRHTNLVSLYGCTSKHSLELLLVYEYISNGTIASHLHGELAKPGLLPWCIRMKIAIETATALTYLHASDIIHRDVKTNNILLTKNFCVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPEYHQCYKLSSKSDVYSFGVVLIELISSKPAVDINRNKEEINLSNLAIKKIQHSAINELVDPCLGFDSDNEVKKSIVSVAELAFQCLQMDKELRPSMDEVLDELRKIESGKDEAEVVEEADTHVAGVSHSNVHTRNSPEWDEVGLLKNMNQPSSPNTVTDIWESKCTTPNFSA* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0448 679 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 29 678 IPR044652 -
Lan20g0448 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Lan20g0448 679 SMART serkin_6 338 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0448 679 Gene3D Transferase(Phosphotransferase) domain 1 415 627 - -
Lan20g0448 679 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524
Lan20g0448 679 Pfam Protein kinase domain 340 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0448 679 ProSiteProfiles Protein kinase domain profile. 338 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0448 679 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 29 678 - -
Lan20g0448 679 SUPERFAMILY Protein kinase-like (PK-like) 323 622 IPR011009 -
Lan20g0448 679 Gene3D Phosphorylase Kinase; domain 1 312 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0448 Lan-Chr20 3158510 3161830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0448 38 679 Receptor kinase-like Gene Family AT1G25390 46.923 5.65e-179 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lan20g0448 Pkinase 3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0448 - - gmx:100305407 801.971