Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0445 ATGGGGACGTTGGAAGAGAATCACAAAACCAAGGCACTGAATCTTCTCCGAACTAGGATTTGTGACCCTAAATTCATCTTCAAACCTCTCTATGATTCTCCTGACAGCAATTTCAGCAAGTTGAAATTCATGATATCAAGTTCAGTGACGGAGGCTTGCAACAATTCTATTCTCCTTCTTGGTCCACGTGGTTCTGGCAAGACTGAGGTTTTAGACCTTGTCATTCAAGACTTGTTCCTTGAATATCCAGACTCCATTTCAATGATTAGGTTGAATGGGCTTTTACATTTTGATGATATCTCTGCATTCAAGGAAATAGCTAGGCAGTTGTGCATGGAGCATGAATTGCTGTTCTCAAAGACGGCATCATTTGATGACAATTCCCAATTTATGGTGGCCATGCTAAAGGAATGTGGATTAGCACATAAAACAGTAATTTTTATTCTGGATGAGTTTGACCTCTTTGCTCAGGGTAAACAACGGTTACTTTATACTTTGCTTGATGCAATGCAATCAATAACATCACAGGCTGTTGTACTTGGCATTAGTTGCCGGCTGGATGCAGATCAGCTGTTGGAGAAAAGAGTACGTTCTCGATTTTCACATAGAAAGCTGATCTTCTTACCACCTTCAGTGGAAGACACGCAAAGATTGCTGGCGCATGTGCTGACATTACCGACGGATTCAAGCTTTCCACATGAATATGCTGTTGAATTTAATAGCAAGGTCCAAAAAATTTTAGAAGACAAAAGGTTGAAAGAAACCTTCAATAAACATCTAAGTTTTGACTCCTCTGTCAAACATTTACTGAGGTTCCTATTCTGTGCAATTTCTCATATGGATTTGCAGACTGGGTTTCTTTCCCGTGAGAACTTTGAAACAGCATTTTCAAATATCCATAGGCAGCCCAAACTGGAATGTATAAGAAATTGTTCAATTTTGGAACTTTACATTTTGGTTTGCATGAAGAGGTTGGAGCTTAAAGAGCAAAGTTTGTGCAATTTCCATTCTGTGATGAAAGAGTATAAAAGTATTCATGATTCCTTCCATAATAGTGATTATTATGCACGGAATGTATGCTTAAGGGCATTTGAACATCTTATAGACCGGGAATTAATATGTTTCACAGACAATAGAGGACATAGTTTGTCTGTTGAATACCGTCCTGTAAAGCTTTTAATCTCACCTACTGAACTTCATCAGGGACTAAGAGCATATCAGTCATGCCCTCCTATCCTTCTAAAGTTAATGGATTGA 1257 0.3866 MGTLEENHKTKALNLLRTRICDPKFIFKPLYDSPDSNFSKLKFMISSSVTEACNNSILLLGPRGSGKTEVLDLVIQDLFLEYPDSISMIRLNGLLHFDDISAFKEIARQLCMEHELLFSKTASFDDNSQFMVAMLKECGLAHKTVIFILDEFDLFAQGKQRLLYTLLDAMQSITSQAVVLGISCRLDADQLLEKRVRSRFSHRKLIFLPPSVEDTQRLLAHVLTLPTDSSFPHEYAVEFNSKVQKILEDKRLKETFNKHLSFDSSVKHLLRFLFCAISHMDLQTGFLSRENFETAFSNIHRQPKLECIRNCSILELYILVCMKRLELKEQSLCNFHSVMKEYKSIHDSFHNSDYYARNVCLRAFEHLIDRELICFTDNRGHSLSVEYRPVKLLISPTELHQGLRAYQSCPPILLKLMD* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0445 418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 225 IPR027417 -
Lan20g0445 418 Gene3D - 35 209 IPR027417 -
Lan20g0445 418 CDD AAA 55 210 - -
Lan20g0445 418 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 218 401 IPR032705 -
Lan20g0445 418 SMART AAA_5 53 210 IPR003593 -
Lan20g0445 418 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 10 418 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Lan20g0445 418 Pfam AAA ATPase domain 39 172 IPR041664 -
Lan20g0445 418 PIRSF ORC4 3 418 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0445 5 418 Core DNA Replication Machinery Family AT2G01120 64.133 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0445 K02606 - gmx:100800582 679.863