Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0432 ATGGTGGTTCATGGCGGGAAAAAGTTGCACCAAATTGTCGCCGGGTTCGGCGGCAATGGCGTTGGTCAGGTACTAGCCGCCGTCGCCGTATCTTTCCTCGTCCGCCTGTTCACAGCTCCCGGCCCCGCTCTCTTGCCGGAGAACGACAATAACGACGACGAGCCAGAGACCGATTCTCACGACGATGAAGCTCATAACTCCGGAAAAGTCACGCCGGTTACAATCCGTTGGAACAACATCAATTGCTCCCTTTCTGATAAATCCTCCAACGTTGTGAGGTTTTTGCTTAAAAATGTGAGCGGAGAAGCAAAACCTGGAAGATTATTAGCTATAATGGGGCCTTCAGGTTCAGGGAAGACAACATTGCTTAATGTTCTTGCAGGTCAGCTGGCAGCATCGCAACGGCTGCATTTGTCGGGCCTTCTAGAGTTCAATGGAAAGCCTTCTTCCAAGAACCCTTACAAGTTTGCCTATGTTAGACAAGAGGATCTCTTTTTCTCACAGCTCACAGTACGGGAAACTCTGTCTCTTGCTACGGAACTCCAGCTTCCCAACATATCTTCTGCAGAAGGGAGAGATGAATACGTGAACAATCTCCTTTTCAAGCTAGGCTTGGTCAGTTGTGCTGATACCAATGTTGGTGATGCAAAAGTTCGTGGAATTAGTGGCGGTGAAAAGAAACGCTTAGCAATGGCATGTGAACTGCTTGCAAGCCCATCTGTTATATTTGCTGATGAACCCACAACAGGACTTGATGCCTTTCAGGCTGAGAAAGTCATGGAAACCCTCCAACAACTGGCACAAGATGGTCACACTGTAATTTGCTCTATTCATCAGCCAAGAGGTTCAGTCTACAGTAAATTCGATGACATTGTGTTGCTAACACAGGGTTCGCTTGTTTATGCTGGTCCTGCTTCTGATGAACCATTGGCTTACTTCTCAAAATCTGGGTACCACTGCCCAGAACATGTGAATCCTGCTGAATTTTTGGCCGATCTTATATCCATAGATTACAGCTCCGCAGATAGTGTATATTCCTCTAAAAAAAGGATTGATGGTCTGGTTGAGTCATTCTCTCAAAGACTATCTACAGTAATATATGCGACTCCGATTACTATAGATGATCTCTCAAAAAGTAAAAAGCAAATCACCAAGAGATCTGTAGCAAAGAAGAAAGGAAGTTGGTGGAAGCAATTTCGGTTGCTGCTTAAACGAGCATGGATGCAGGCTTCCCGAGATGCACCAACAAACAAAGTTCGGGCGAGGATGTCAATTGCATCAGCAATTATCTTTGGGTCTGTTTTTTGGAGAATGGGAAAATCTCAGACTTCAATACAAGATAGAATGGGATTGCTTCAGGTTGCCGCAATAAACACAGCTATGGCTGCTCTCACAAAGACAGTAGGTGTGTTTCCAAAGGAACGGGCAATTGTTAATAGAGAACGGGCAAAAGGCTCCTATGCCTTGGGTCCCTATCTGCTTTCAAAATTGTTTGCTGAGATTCCTATTGGAGCAGCATTTCCGTTGATGTTTGGTGCTGTTTTGTACCCCATGGCACGTCTTCATCCTACTTTGCTGAGATTTGCTGAATTCTGTGGAATTGTCACTGTGGAATCTTTTGCTGCATCTGCAATGGGTCTCACCGTTGGTGCCATGGTTCCAACCACAGAAGCAGCAATGGCAGTAGGCCCATCTCTTATGACAGTTTTTATTGTATTTGGAGGCTACTATGTCAATCCTGAGAATACCCCAATCATCTTCCGCTGGATTCCTAGTGTGTCTCTGATTAGATGGGCCTTTCAGGGACTTTGCGTCAATGAATTTAAAGGTCTTCAATTTGATCATCAACATTCATTTGACATTCAAACTGGAGAACAGGCACTAGAGCGTATTTCATTTGGAGGCAGTAGGATTAGAGATACGGTGGTAGCACAAAATAGAATACTGTTATTTTTGTATTGCACCACCTTCCTTCTCCTTGAGAAAAACAAACCCAAATACCAGCAACTTGAGCCAACACCTATTGACCACAACAAACCACATTTAGAACTCAAGGATTTAGACTCCGAACAAGTTGATCAGAGACTTGAATCTCCACCGGCCACGGAAGATGAATCCAATCAGCCCCTTGAATCTCCACCGGTCACGGAAGATGAATCCAATCAGCCCCTTGAATCACCTGAAGTAGATAACCCAATTGGTTCTTTTGTCCTAGAAGGTGCTAAGTAA 2229 0.4477 MVVHGGKKLHQIVAGFGGNGVGQVLAAVAVSFLVRLFTAPGPALLPENDNNDDEPETDSHDDEAHNSGKVTPVTIRWNNINCSLSDKSSNVVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASQRLHLSGLLEFNGKPSSKNPYKFAYVRQEDLFFSQLTVRETLSLATELQLPNISSAEGRDEYVNNLLFKLGLVSCADTNVGDAKVRGISGGEKKRLAMACELLASPSVIFADEPTTGLDAFQAEKVMETLQQLAQDGHTVICSIHQPRGSVYSKFDDIVLLTQGSLVYAGPASDEPLAYFSKSGYHCPEHVNPAEFLADLISIDYSSADSVYSSKKRIDGLVESFSQRLSTVIYATPITIDDLSKSKKQITKRSVAKKKGSWWKQFRLLLKRAWMQASRDAPTNKVRARMSIASAIIFGSVFWRMGKSQTSIQDRMGLLQVAAINTAMAALTKTVGVFPKERAIVNRERAKGSYALGPYLLSKLFAEIPIGAAFPLMFGAVLYPMARLHPTLLRFAEFCGIVTVESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIIFRWIPSVSLIRWAFQGLCVNEFKGLQFDHQHSFDIQTGEQALERISFGGSRIRDTVVAQNRILLFLYCTTFLLLEKNKPKYQQLEPTPIDHNKPHLELKDLDSEQVDQRLESPPATEDESNQPLESPPVTEDESNQPLESPEVDNPIGSFVLEGAK* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0432 742 MobiDBLite consensus disorder prediction 701 728 - -
Lan20g0432 742 MobiDBLite consensus disorder prediction 44 70 - -
Lan20g0432 742 Pfam ABC-2 type transporter 398 608 IPR013525 GO:0016020|GO:0140359
Lan20g0432 742 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 676 - -
Lan20g0432 742 MobiDBLite consensus disorder prediction 676 700 - -
Lan20g0432 742 Gene3D - 62 311 IPR027417 -
Lan20g0432 742 ProSitePatterns ABC transporters family signature. 221 235 IPR017871 GO:0005524
Lan20g0432 742 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 307 IPR027417 -
Lan20g0432 742 MobiDBLite consensus disorder prediction 669 742 - -
Lan20g0432 742 CDD ABCG_EPDR 72 303 - -
Lan20g0432 742 Pfam ABC-2 type transporter 278 335 IPR043926 GO:0140359
Lan20g0432 742 Pfam ABC transporter 96 248 IPR003439 GO:0005524
Lan20g0432 742 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 75 321 IPR003439 GO:0005524
Lan20g0432 742 PANTHER ABC TRANSPORTER G FAMILY MEMBER 7 1 676 - -
Lan20g0432 742 SMART AAA_5 105 298 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0432 Lan-Chr20 2998557 3006935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0432 95 303 Calmodulin-binding Proteins AT2G36910 27.907 2.08e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0432 K05681 - gmx:100788256 1222.61