Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0418 ATGGGTAGCCTAGAGGCACAAAGAACTACAGTTGGATGGGCAGCAAGAGATTCTTCTGGGATTCTCTCCCCATACACCTTCACTCTTAGAAACACAGGCCCGGATGATATCTACATTAAAGTTCACTACTGTGGACTTTGCCATTCTGATCTCCATCAAATAAAAAATGATCTTGGCATGTCCAACTATCCCATGGTCCCGGGGCATGAGGTGGTTGGTGAGGTACTAGAGGTGGGTTCAGATGTTACGAGGTTCAAAGTTGGAGAGATAGTTGGAGCTGGACTTCTTGTTGGATGCTGCAAAAGTTGCCATGCATGCCAATCAGATATTGAACAATACTGCAGCAAGAAAATCTGGTCTTACAATGATGTCTATACTGATGGAAAACCCACACAAGGTGGCTTTGCTAAAACCATGGTCGTTGAGCAAAAGTTTGTTGTGAAAATACCAGAGGGATTGACACCAGAACAAGTTGCACCATTATTGTGTGCTGGTGTGACTGTGTATAGTCCACTGACACACTTTGGGCTGAAAACGAGTGGGTTGAAGGGTGGAATATTAGGTCTTGGAGGAGTAGGACACATGGGTGTGAAGATAGCAAAGGCATTTGGTCACCATGTCACTGTAATAAGCTCTTCTGATAAGAAGAAGAAGGAGGCACTTGAGCACCTTGGAGCTGATGAGTATCTGGTTAGCTCAGATACCACAAGCATGCAGGGAGCTGCTGATTCACTTGACTATATCATTGACACTGTGCCTGTTGGTCACCCTCTTGAGCCTTATCTTTCCTTGCTCAAGGTTGATGGCAAGCTGATCTTGATGGGTGTCATAAACACCCCTCTTCAATTTGTTAGCCCTATGGTTATGCTTGGTAGGAAGTCAATCACAGGGAGCTTCGTTGGGAGCATAAAGGAGACTGAGGAGATGCTAGAGTTATGGAAAGAGAAGGGTCTGAGTTCCATGATTGAAGTGGTAAAAATGGATTACATTAACAAAGCACTTCAAAGGTTGGAGAATAACGATGTCAGATATAGATTTGTTGTGGATGTTAAAGGCAGCAAATTTGACCAGTGA 1074 0.4413 MGSLEAQRTTVGWAARDSSGILSPYTFTLRNTGPDDIYIKVHYCGLCHSDLHQIKNDLGMSNYPMVPGHEVVGEVLEVGSDVTRFKVGEIVGAGLLVGCCKSCHACQSDIEQYCSKKIWSYNDVYTDGKPTQGGFAKTMVVEQKFVVKIPEGLTPEQVAPLLCAGVTVYSPLTHFGLKTSGLKGGILGLGGVGHMGVKIAKAFGHHVTVISSSDKKKKEALEHLGADEYLVSSDTTSMQGAADSLDYIIDTVPVGHPLEPYLSLLKVDGKLILMGVINTPLQFVSPMVMLGRKSITGSFVGSIKETEEMLELWKEKGLSSMIEVVKMDYINKALQRLENNDVRYRFVVDVKGSKFDQ* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0418 357 Gene3D - 164 320 - -
Lan20g0418 357 CDD CAD1 11 349 - -
Lan20g0418 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 153 318 IPR036291 -
Lan20g0418 357 Pfam Alcohol dehydrogenase GroES-like domain 34 149 IPR013154 -
Lan20g0418 357 SUPERFAMILY GroES-like 17 181 IPR011032 -
Lan20g0418 357 PANTHER ALDEHYDE REDUCTASE 5 357 - -
Lan20g0418 357 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491
Lan20g0418 357 Gene3D - 13 350 - -
Lan20g0418 357 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 5 357 - -
Lan20g0418 357 Pfam Zinc-binding dehydrogenase 191 312 IPR013149 -
Lan20g0418 357 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0418 Lan-Chr20 2913739 2915685 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0418 1 355 Monolignol Biosynthesis Gene Families AT3G19450 76.404 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0418 K00083 - gmx:100804892 613.224