Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0410 ATGGAGGCCAAGCATGAATTTGGAGTGGACCATCATTTGAAGAACACAACAACAATCACTGGGACCAGTTTCTCTCAGTTACTATTGGCAGATGATGATAATGAAGATGATAATGCATTGGGTCTTGGTGTGGACCAGACTTACAACAACAACAATACCAACCTTACCGATTATTCTCCTATTTTTCCCATTCACATTGCACCACAAATGTTATGTTTTGGCAACTATCAAAATGAAGAGGACCTTACCAATGTATTAACCCCTCAGAAATCTGTCATCACTAATTCCAGTGATTCTTCTTCTGCTTCTTCTTGCAACAACACCACCATCTTCAATTCCTTCTCTAAGCCCGATTTGAAGAGTTTGCAGAAAAAGCGAAATGGGTCTGGACAAGAACCTGTTACAAAAGCAGGGGTTGGAAGCCAGAGACCACCTAAGAAGACCAAAGCAGATAACCCCACTTCAACTGGACATGCAAAGAGAAAGGAGAAACTTGGGGAAAGAATTGCTGCATTACAACAGCTTGTTTCTCCATTTGGCAAGACAGATACAGCTTCAGTGCTTCACGAGGCCATGGGCTACATCAAATTTTTACAAGACCAAGTTCAAGTCCTTTGCTCCCCTTACCTGCAACGCTTGCCTTATTCACACCACCAACTTGGAGACGGAGATAACAATGGAGAGGAAGTGACGAAAGATTTGAGGAGCAGGGGTCTTTGCCTGATCCCTATGGAATGCACCGTACACGTGGCAAGTAGCAACGGTGCTGATTTCTGGTCACCTGCTGCAATAGGGAATAATATTTCACCATCAACAACTATGCAGTGA 828 0.4336 MEAKHEFGVDHHLKNTTTITGTSFSQLLLADDDNEDDNALGLGVDQTYNNNNTNLTDYSPIFPIHIAPQMLCFGNYQNEEDLTNVLTPQKSVITNSSDSSSASSCNNTTIFNSFSKPDLKSLQKKRNGSGQEPVTKAGVGSQRPPKKTKADNPTSTGHAKRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIKFLQDQVQVLCSPYLQRLPYSHHQLGDGDNNGEEVTKDLRSRGLCLIPMECTVHVASSNGADFWSPAAIGNNISPSTTMQ* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0410 275 MobiDBLite consensus disorder prediction 120 163 - -
Lan20g0410 275 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 68 254 - -
Lan20g0410 275 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 149 198 IPR011598 GO:0046983
Lan20g0410 275 PANTHER BASIC HELIX-LOOP-HELIX (BHLH) DNA-BINDING SUPERFAMILY PROTEIN-RELATED 68 254 - -
Lan20g0410 275 CDD bHLH_AtbHLH_like 160 205 IPR045239 -
Lan20g0410 275 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 160 211 IPR036638 GO:0046983
Lan20g0410 275 Gene3D - 159 213 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0410 Lan-Chr20 2851262 2853455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0410 160 262 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 58.654 1.67e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0410 - - gmx:100809317 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0511 8 7404614 7406610 Lan20g0410 20 2851262 2853455 LSH
Lan20g0410 20 2851262 2853455 Lan4g1495 4 24077577 24079736 LSH