Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0408 ATGACCAATGAAGATGAAACTATTGCAACAGCCATGGAACAGCCAAGTGATGTGATGACTGGAGACTACAACAATGATGGAAGCAAAAGCAATAATCCAAAAGAGTGGTTGAACCTGAGCTTAGGAGGCACTTCATTCTCAACAACAGGAGATGCTGATTCAAAATCAAGACCAGCAACAACCAAAGTTTTCTCATGCAACTTCTGCATGAGGAAATTCTTTAGCTCACAAGCATTAGGAGGTCATCAGAACGCCCACAAAAGGGAGAGAGGTGCTGTCAAAAGATACCAGACTCAGAGGACAGAGGCAATGACGGGTTTCTCCATGAACAATCATATGTTTCAATCTCTTGGTTTCCAGCCCCATGCACTCGTGCACAAACCATGCAGAGGAGGTAGAACTATGATGGCACCAAGCTTTCATGATGCATATGCAATGGCATGTACACCTTTCATGATTGAGGAACAAACGGATCTAGTGTGGCCAGGCAGCTTTCGTTTAGTTCCAGAACAATCTGAACCACCACAGAAGTCACTGAAGCTTGATTTAAACCTCAGACTTTGA 564 0.4379 MTNEDETIATAMEQPSDVMTGDYNNDGSKSNNPKEWLNLSLGGTSFSTTGDADSKSRPATTKVFSCNFCMRKFFSSQALGGHQNAHKRERGAVKRYQTQRTEAMTGFSMNNHMFQSLGFQPHALVHKPCRGGRTMMAPSFHDAYAMACTPFMIEEQTDLVWPGSFRLVPEQSEPPQKSLKLDLNLRL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0408 187 ProSitePatterns Zinc finger C2H2 type domain signature. 66 86 IPR013087 -
Lan20g0408 187 PANTHER ZINC FINGER PROTEIN 4-LIKE 5 187 - -
Lan20g0408 187 ProSiteProfiles Zinc finger C2H2 type domain profile. 64 91 IPR013087 -
Lan20g0408 187 MobiDBLite consensus disorder prediction 1 36 - -
Lan20g0408 187 SUPERFAMILY beta-beta-alpha zinc fingers 61 90 IPR036236 -
Lan20g0408 187 Gene3D Classic Zinc Finger 45 116 - -
Lan20g0408 187 PANTHER ZINC FINGER PROTEIN 4-LIKE 5 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0408 Lan-Chr20 2838697 2840200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0408 24 184 C2H2 Transcription Factor Family AT1G24625 37.791 1.49e-23 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0408 - - gmx:100811125 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0514 8 7423806 7425315 Lan20g0408 20 2838697 2840200 LSH
Lan20g0408 20 2838697 2840200 Lan4g1498 4 24107620 24108824 LSH