LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan20g0362	ATGGCTATGACACCTTCAAGAGTGATTTTCTTTCCTTGTTTCCTTGTTATTATACTCATAAATCATACCATAGCCCAGGAAAGGTTCCTGTACAATGTCTGCAATGATAATTTAGGCAACTATACTGCAAACAGTACCTACAAGACCAATCTCAATACCCTTTTGTCTACTTTGTCTTCCAACACACAAATTGATTATGGTTTCTACAATTTCTCTCAGGGTCAAGACTCTGACAAAGTTAACGGAATTGGGATGTGTAGAGGAGATGTTACACCAGATGCGTGCCGCAGTTGCCTCAATGAGTCAACAGTTTTTCTCACACAGAATTGCCCAAATCAGAAAGAGGCCATTGTATGGTATGATAATTGCATGTTACGCTACTCGAACCGCTCAATATTCGGGGTTAAGGAATCTAATCCTACGTTCTATATTTATGCATTAAGCAATGCAACTGATATGGATCAGTTCAATGATGTCCTCAGGGACTTGGTTGATAATCTGAGTAGCAAAGCTGCTTCTGGTGATTCCTTTAAAAAGTATGCTGCAGGAAGTGCCCAAGGTCCAAGTTTTCAAACTATATTTGCACTTTTGCAATGCACACCTGATTTATCAGAGCAAGAGTGCAGTGATTGCTTGGTAGAAAGTATCAATGATATCTCAAGTTGTTGTGCTGGCAGAATAAATGGCAGAATTGGAAAACCAAGCTGCAATCTTAGATTCGATACATCGCCGTTCTATGACTCCACAGTTAATACCGCTCAACCGCCAGCACCACAAGTGCCTCCTCCTCCATTCACTAATACCACTTCCACACAAGGAAAGAGCAACACAACAACAATCGTCGTTGCGGTAGTTGTTCCTGTTGTTGTCATCGCTGTGCTGATTATCTTAGTCTGCATCTTCTTAAGAGCAAGGAAGCAAAGGGAAAATATTGACACTGACACTGAACTTGACAGTGAAATTGAACCTGTTGAGACATTGCAATTCAACTTTGAAAATATCAGAATGGCTACAAATAACTTTTCTGATGCAAATATGCTAGGAAAAGGAGGGTTTGGACCTGTTTACAAGGGTAAGCTTTCCAATGGAGAAGAGATTGCTGTCAAAAGGTTGTCAATGAATTCTGGACAAGGAGATACAGAATTCAAGAATGAAGTGCAGTTAGTGGCCAAACTTCAACACCGAAATTTAGTCCGGCTATTTGGTTTCTGTTTGGAAAAAAGAGAAAGGTTACTGGTCTATGAGTTTGTTCCCAATAAAAGCCTTGATTACTTCATTTTTGATCCAATTAAGCGTGTGCATTTGGATTGGGAAAGGCGATATAAAATCATAGGAGGCATTGCCAAAGGCCTTCTTTACCTTCATGAGGATTCACGTCTGCGTATTATTCATCGTGATCTCAAAGCAAGCAACATTCTCTTAGATGCAGAGATGAACCCCAAGATATCAGATTTTGGGATGGCAAGATTGTTTGTTTTGGATCAAACTCAAGGAGACACAAGCAGAATTGTTGGAACTTATGGATATATGGCACCTGAGTATGTGACGCAAGGAAAATTCTCCGTGAAGTCAGATGTTTTCAGTTTCGGCGTGCTGGCTCTGGAGATAGTATGTGGCCAGAAAAATAGTGGCTTCCGTAATGGAGAGCATGTAGAGGATCTAATAAGCTTTGCCTGGAAAAGCTGGAAGGATGGAACAGCAACAAATCTGATAGATCCTGCTATAAATAATGGTTCAAGAAATGAAATAATGAGATGCATCCACATTGGCTTACTATGTGTTCAGGAAAATTTAGCTGACAGACCTACCATGGCTTCTGTTGTACTTATGCTTAATAGTTACTCTACCACTCTCCCAGTACCTTCAGAGCCTGCATTTTTTATGCAGAGTAGAGGCATGTCAGATATTCAATCATGGGAGTATAATTCAAAGGCAACAGAGTCTACTAAGTCTGTTAAAGCATACTCAAGTGAGGTCTTAGTTATTGGGAATTACCCTCGATAG	2004	0.4022	MAMTPSRVIFFPCFLVIILINHTIAQERFLYNVCNDNLGNYTANSTYKTNLNTLLSTLSSNTQIDYGFYNFSQGQDSDKVNGIGMCRGDVTPDACRSCLNESTVFLTQNCPNQKEAIVWYDNCMLRYSNRSIFGVKESNPTFYIYALSNATDMDQFNDVLRDLVDNLSSKAASGDSFKKYAAGSAQGPSFQTIFALLQCTPDLSEQECSDCLVESINDISSCCAGRINGRIGKPSCNLRFDTSPFYDSTVNTAQPPAPQVPPPPFTNTTSTQGKSNTTTIVVAVVVPVVVIAVLIILVCIFLRARKQRENIDTDTELDSEIEPVETLQFNFENIRMATNNFSDANMLGKGGFGPVYKGKLSNGEEIAVKRLSMNSGQGDTEFKNEVQLVAKLQHRNLVRLFGFCLEKRERLLVYEFVPNKSLDYFIFDPIKRVHLDWERRYKIIGGIAKGLLYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMARLFVLDQTQGDTSRIVGTYGYMAPEYVTQGKFSVKSDVFSFGVLALEIVCGQKNSGFRNGEHVEDLISFAWKSWKDGTATNLIDPAINNGSRNEIMRCIHIGLLCVQENLADRPTMASVVLMLNSYSTTLPVPSEPAFFMQSRGMSDIQSWEYNSKATESTKSVKAYSSEVLVIGNYPR*	668

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan20g0362	667	ProSiteProfiles	Gnk2-homologous domain profile.	29	132	IPR002902	-
	Lan20g0362	667	CDD	STKc_IRAK	347	612	-	-
	Lan20g0362	667	SUPERFAMILY	Protein kinase-like (PK-like)	326	642	IPR011009	-
	Lan20g0362	667	MobiDBLite	consensus disorder prediction	254	273	-	-
	Lan20g0362	667	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	5	651	-	-
	Lan20g0362	667	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	462	474	IPR008271	GO:0004672\|GO:0006468
	Lan20g0362	667	Pfam	Salt stress response/antifungal	149	242	IPR002902	-
	Lan20g0362	667	Pfam	Salt stress response/antifungal	34	129	IPR002902	-
	Lan20g0362	667	SMART	serkin_6	341	615	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan20g0362	667	Pfam	SKG6 family	270	343	IPR014805	-
	Lan20g0362	667	Gene3D	Phosphorylase Kinase; domain 1	302	416	-	-
	Lan20g0362	667	Pfam	Protein kinase domain	343	549	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan20g0362	667	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	5	651	-	-
	Lan20g0362	667	Gene3D	Transferase(Phosphotransferase) domain 1	417	620	-	-
	Lan20g0362	667	Gene3D	-	139	245	IPR038408	-
	Lan20g0362	667	Gene3D	-	26	131	IPR038408	-
	Lan20g0362	667	ProSiteProfiles	Protein kinase domain profile.	341	615	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan20g0362	667	ProSiteProfiles	Gnk2-homologous domain profile.	138	245	IPR002902	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan20g0362	Lan-Chr20	2525414	2528631	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan20g0362	3	667	Receptor kinase-like Gene Family	AT4G21410	50.363	0.0	639

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Lan20g0362		Pkinase	3.4e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan20g0362	-		-	gmx:102662291	1013.45