Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0361 ATGAATGAGAAACAAAACAAAGGTGCACATATCAATACTCTTATGATCACACAGATGTTTCACTTCAGCAAATATGTAACCTCATTTCTGTTATTCTCTTTGTTCTTTGGATCACTTACCTCAGCATCTCCGAATTACAACGGTATATATTGTCCAAACAACATTACCTATGAAATCAACAACAACACTATCTCCCAAACCAATCTCAATGTCCTTCTATCTTCTCTCCTATCCAACGCCACCGAAGGCAGTAGCTCCTACACCACTGCCATGGGAATGGGCACCAGCAACGCCCTCAACGGCCTCTACCTCTGCCGCGGCGATGTCTCCTCTGCAACCTGTGCAGAGTGCGTAGCTGCAGCAGTTACAAACATAACAAAACTCTGCCCAAACAAGAAAGAATCGATAATATGGTTCGACGAGTGCATGTTGCATTACACAAACACTTACTTCAACCCTTTAAGTATTGAGCCAAGATTGAATTTGTGGGATAACAAAAACATATCTACATTGGATGTAGATAACTTCAATGAAATGCTTTTAAGCTTCTTGGGAAGTTTGGCTTCAGAAGCTTCGAATACCGAGTCATCGATGAAATTTTCCACTGGGGAATGGAACTTCACGAAGGAGATAACAGTGTATGGATTGGCACAGTGTTTACCTGGTGTGACAAATGAACAGTGTGAGGGGTGTTTGGTAAATGGTTCTAAGACTCTTGTTACTTGTTGTGAAGGAAAACAAGGTGCACGAGCTTTGCTTGCATGGTGTAATATCAGATATGATTTGTTCCAATTTTACAATACAACTCAAACATCAGCATCACCACCTCTTTTTTCTCCTCCTCCTCCTTCAGGAAAGAGGAAATCCAAGACCAAAATAATTGTAATCATTGTTGTAGTGGTTGTCTTTTCGATAATTCTCTTATGTTTGGGATGTGGTTTTCTATTGAGAAGAAGATTAAGGAAGAAATATAAAACACTTCTAAAAGAAAATTTTGGGGATGAAAGTGAGGCTTTGGAATCATTACAATATAATTTATCAACAATTGAGGCTGCAACAGAAAAGTTTTCAAATGAAAACAAAATAGGCAAGGGAGGATTTGGAGAAGTTTACAAGGGTGTTCTTTCAAATGGACGAGAAATAGCTGTGAAAAAACTCTCCCAAAGTTCAGGACAAGGGACAATTGAGTTCAAGAATGAGGTTTTATTGATAGCTAAACTTCAACACAGAAATTTGGTTGCTTTAGTAGGATTTTGCTTGGAGGCACAAGAGAAAATGCTCATTTATGAATATGTGCCTAATAAAAGTCTTGATTACTTTCTATTTGATCCTCTTAAGAGCAAATTATTGAATTGGTCGGAGCGTTACAAAATTATTAAAGGCATTGCACAAGGAATTCATTACTTACATGATCATTCAAGGCTAAAAATTATACATCGTGATCTCAAAGCAAGCAATGTGTTGTTAGATAGCAGCATGAATCCAAAAATAGCAGACTTTGGTATGGCAAGAATAATTGGTTTAGATCAAGATCGAGGAAAAACAAATAGAATTGTTGGAACATATGGTTATATGTCTTCAGAATACGCTATGTATGGACGATTTTCAGAAAAATCGGATGTATTTAGTTTTGGAGTCATTCTTCTGGAGATAATTAGTGCAAAGCGAAATGCTCATTCTATTTTGTCAGATGATGTTGAATACCTCTTGAGTTATGCATGGAGACAATGGAGGGATGAAACACCAATACAAATATTAGACGAAGATATTAGAGAATCTTGCAATGAAAGTGAAGTGATTAAGTGCATTCAAATTGGTTTATTATGTGTACAAGATAAAGCAGATGATAGACCTACTATGGGAAAAGTTATTTCTTATTTCAGTAACTCTGACTCTGAAGCTGAGTTACCATTTCCTGGAGAACCAATAAATTCTATGCATAATCAAATATTGCAAAAGACAGTAGCAGCAGGGGAATCAAGTTCTGGTTCTATACAATTAACTGAATTGTCCATGCCTCGGTAG 2025 0.3704 MNEKQNKGAHINTLMITQMFHFSKYVTSFLLFSLFFGSLTSASPNYNGIYCPNNITYEINNNTISQTNLNVLLSSLLSNATEGSSSYTTAMGMGTSNALNGLYLCRGDVSSATCAECVAAAVTNITKLCPNKKESIIWFDECMLHYTNTYFNPLSIEPRLNLWDNKNISTLDVDNFNEMLLSFLGSLASEASNTESSMKFSTGEWNFTKEITVYGLAQCLPGVTNEQCEGCLVNGSKTLVTCCEGKQGARALLAWCNIRYDLFQFYNTTQTSASPPLFSPPPPSGKRKSKTKIIVIIVVVVVFSIILLCLGCGFLLRRRLRKKYKTLLKENFGDESEALESLQYNLSTIEAATEKFSNENKIGKGGFGEVYKGVLSNGREIAVKKLSQSSGQGTIEFKNEVLLIAKLQHRNLVALVGFCLEAQEKMLIYEYVPNKSLDYFLFDPLKSKLLNWSERYKIIKGIAQGIHYLHDHSRLKIIHRDLKASNVLLDSSMNPKIADFGMARIIGLDQDRGKTNRIVGTYGYMSSEYAMYGRFSEKSDVFSFGVILLEIISAKRNAHSILSDDVEYLLSYAWRQWRDETPIQILDEDIRESCNESEVIKCIQIGLLCVQDKADDRPTMGKVISYFSNSDSEAELPFPGEPINSMHNQILQKTVAAGESSSGSIQLTELSMPR* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0361 674 SMART serkin_6 356 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0361 674 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 28 654 - -
Lan20g0361 674 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 28 654 - -
Lan20g0361 674 ProSiteProfiles Gnk2-homologous domain profile. 45 151 IPR002902 -
Lan20g0361 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Lan20g0361 674 Gene3D - 159 265 IPR038408 -
Lan20g0361 674 Gene3D - 48 151 IPR038408 -
Lan20g0361 674 Pfam Salt stress response/antifungal 174 261 IPR002902 -
Lan20g0361 674 Pfam Salt stress response/antifungal 60 148 IPR002902 -
Lan20g0361 674 Gene3D Phosphorylase Kinase; domain 1 319 431 - -
Lan20g0361 674 Pfam Protein tyrosine and serine/threonine kinase 358 625 IPR001245 GO:0004672|GO:0006468
Lan20g0361 674 ProSiteProfiles Gnk2-homologous domain profile. 156 265 IPR002902 -
Lan20g0361 674 ProSitePatterns Protein kinases ATP-binding region signature. 362 385 IPR017441 GO:0005524
Lan20g0361 674 SUPERFAMILY Protein kinase-like (PK-like) 341 651 IPR011009 -
Lan20g0361 674 CDD STKc_IRAK 362 627 - -
Lan20g0361 674 ProSiteProfiles Protein kinase domain profile. 356 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0361 674 Gene3D Transferase(Phosphotransferase) domain 1 432 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0361 Lan-Chr20 2520158 2523451 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0361 22 639 Receptor kinase-like Gene Family AT4G05200 45.728 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan20g0361 PK_Tyr_Ser-Thr 6.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0361 - - ccaj:109813299 824.313