Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0356 ATGGCTCTTGAACAACAACAACTATCCCTCGATCACAACCCAAACCCCGTTGACGGCGAGCCTGACGGAACAACTAACGGCGGAGATGACGGTGGCAAAGCACCAAGACTGCCACGTTGGACAAGGCAAGAGATTGTGGTATTAATACAGGGAAAGAGAGATGCTGAGAATAAGTTCCGGAGGGGTCGAACCGCCGGTTTTTCTTTCGGTTCGGGTCAGGTTGAACCGAAATGGGCGTTAGTTTCTTCTTACTGTGCAAAACATGGGGTGAACCGGGGTCCGGTTCAGTGCAGAAAGAGGTGGAGTAATCTGGCGGGAGATTATAAGAAGATCAAAGAGTGGGAGTCTCAGATAAAGGATGAAACGGAGTCGTATTGGGTTATGAGGAATGATTTAAGGAGAGAGAGAAAATTGCCTGGGTTTTTCGATAAGGAGGTTTTCGATATTCTTGATTCTGGGTCTCCGGTGACGGCGCTCTCGCCGGCGTTAGTGTTAGCTTTGTCGTCGCCGGAGGGTTATAGCGAGCCACCGCAGACTCATGTGTATGATAGTAATAGGAGTGTGGGTGGGTTGTTTTCTGATTTTGAACATGATGAGGTGGGTGGTAGTCCCAGTTCTGAGAAGAAGGATGTTCCTGTTGCTACTCCTATTCCAGAGAAACGATATCAACCAATCTACCATGTTTCCCATGGCGAAGGTAATGCTCAAGGCATGACCAACGGGAAACAGCCAGCTTCAAATCCAGAAACGGGCTCTACATCTCAAGGAGAACGGAAAAGGAAGCGTTTAGCATCTGATGCAGAGGAGGAAACTTTGCAATATCAATTGATTGATGTCTTAGAAAGAAATGGCAAAATGCTAAATACCCAACTTGAAGCTCAGAATATAAATTTCCAGTTGGATTGCCAGCAGCGGAAGGATCATTCGAATAACTTGGTTGCTGTACTTGATAAGCTTGCAAATGCTCTTGGGAGAATTGCTGATAAATTATAG 993 0.4632 MALEQQQLSLDHNPNPVDGEPDGTTNGGDDGGKAPRLPRWTRQEIVVLIQGKRDAENKFRRGRTAGFSFGSGQVEPKWALVSSYCAKHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIKDETESYWVMRNDLRRERKLPGFFDKEVFDILDSGSPVTALSPALVLALSSPEGYSEPPQTHVYDSNRSVGGLFSDFEHDEVGGSPSSEKKDVPVATPIPEKRYQPIYHVSHGEGNAQGMTNGKQPASNPETGSTSQGERKRKRLASDAEEETLQYQLIDVLERNGKMLNTQLEAQNINFQLDCQQRKDHSNNLVAVLDKLANALGRIADKL* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0356 330 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 8 330 - -
Lan20g0356 330 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 8 330 - -
Lan20g0356 330 Pfam Myb/SANT-like DNA-binding domain 39 128 IPR044822 -
Lan20g0356 330 Gene3D - 40 110 - -
Lan20g0356 330 MobiDBLite consensus disorder prediction 254 268 - -
Lan20g0356 330 ProSiteProfiles Myb-like domain profile. 39 105 IPR001005 -
Lan20g0356 330 MobiDBLite consensus disorder prediction 233 253 - -
Lan20g0356 330 MobiDBLite consensus disorder prediction 192 214 - -
Lan20g0356 330 MobiDBLite consensus disorder prediction 1 39 - -
Lan20g0356 330 CDD GT1 38 112 - -
Lan20g0356 330 MobiDBLite consensus disorder prediction 230 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0356 Lan-Chr20 2475432 2478793 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0356 23 136 Trihelix Transcription Factor Family AT1G13450 31.034 6.23e-07 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan20g0356 Myb_DNA-bind_4 6.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0356 - - gmx:100797767 445.277