Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0337 ATGTCTGATTCAGATCAATGCCCTTTTGACTCTCCCAGAATTGTTATGAACAAGGTTTTATCCAAATCTCAACAAGAAGGTGATGGAGCACTTGTCAGAAGAGGCATTGGAAGAAGTGAGTTGCCAAGGTTGGATCCATTTCTGATGTTGGATCACTTCTCAGTAACCCCTCCTGCAGGGTTTCCTGACCATCCACACAGAGGTTTTGAGACTGTCACCTATATGCTAGAGGGAGGGATAACTCATCAAGATTTTGCTGGACGCAAAGGTACAATAAGAACTGGTGATGTTCAATGGATGACAGCAGGAAGAGGAATTGTTCACTCTGAAATGCCTGCAGGAGAAGGAACTCACAAGGGAATACAACTATGGATCAATCTATCTGCTACAGACAAAATGATTGAACCAAACTATCAAGAGCTTCTAAGTGAGGACATTCCATCAGCAGAACAAGATGGTGTTGAAGTAAAGGTGATAGCAGGAGAAGCAATGGGAGTCCATTCACCAGTTTACACTAGAACTCCAACCATGTTCCTTGATTTTACTCTCAACCCTGGAGCTGAATTGCACCAAACTATTCCAGACTCATGGAATGCCTTTGTTTATGTGATTGAAGGAGAAGGATTTTTTGGTTTCCAATGTTGTTCACCAATTACAAGTCACCATGTAGTGGTGTTAAGTCTAGGTGATGGTGTTAGTGTATGGAACAAGTCCTCAGATGCATTGAGGTTTGTGCTTATAGGAGGACAGCCACTGAATGAGCCAGTGGCACAGTATGGTCCATTTGTGATGAATACACAATCTGAGATTGAAAAAACCATTCAGGACTATCACTATAGCAAGAATGGGTTTGAGAATGGAAAATCTTGGAGATCTCAATAG 882 0.4195 MSDSDQCPFDSPRIVMNKVLSKSQQEGDGALVRRGIGRSELPRLDPFLMLDHFSVTPPAGFPDHPHRGFETVTYMLEGGITHQDFAGRKGTIRTGDVQWMTAGRGIVHSEMPAGEGTHKGIQLWINLSATDKMIEPNYQELLSEDIPSAEQDGVEVKVIAGEAMGVHSPVYTRTPTMFLDFTLNPGAELHQTIPDSWNAFVYVIEGEGFFGFQCCSPITSHHVVVLSLGDGVSVWNKSSDALRFVLIGGQPLNEPVAQYGPFVMNTQSEIEKTIQDYHYSKNGFENGKSWRSQ* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0337 293 CDD cupin_pirin_C 175 251 - -
Lan20g0337 293 Gene3D Jelly Rolls 26 278 IPR014710 -
Lan20g0337 293 SUPERFAMILY RmlC-like cupins 13 291 IPR011051 -
Lan20g0337 293 Pfam Pirin 33 125 IPR003829 -
Lan20g0337 293 PANTHER PIRIN-LIKE PROTEIN 1 293 - -
Lan20g0337 293 Gene3D Jelly Rolls 147 252 IPR014710 -
Lan20g0337 293 CDD cupin_pirin_N 30 127 - -
Lan20g0337 293 PANTHER PIRIN-RELATED 1 293 IPR012093 -
Lan20g0337 293 PIRSF Pirin 11 291 IPR012093 -
Lan20g0337 293 Pfam Pirin C-terminal cupin domain 178 282 IPR008778 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0337 Lan-Chr20 2336294 2338335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0337 12 288 Calmodulin-binding Proteins AT3G59220 63.799 3.46e-129 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0337 K06911 - jre:108986319 472.241