Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0330 ATGAAAGGACGTTCAAGGCGCAAAATTGGCGTTGTTGAAGATGAATTCCGAGCTGTGAAGAGGGAACGGCTCAATGAAAACGCTGAGGAGGAAGAACATGAACAAGACCCCGCTAGTCGCAGAATTATTCGCTCCCAATTTCTCGAACTCAAAACTCTCATTAACGATAAAAGGGATAACTTGATGAACACGGACTCGGATAAGTTCGATACAATCTTGAATGAGCTCAAGAAATTGCATGATCAGGTTCAAAAGCCGAGAGAACAGGTTGCAGATGCTGAGGCACTGCTGGATTTGACACACACTCTTTTGGGATCTGTGAAGTCTTTGCTTAATGAGGGGATTACCCCAGCTCAATTTGTTGGCTCTTTGCTGAAAGACTACAGCCAAGAGGGTACTGAAAATTCAATCGACTGGAAAAAGCTTGGGATGGTTGTATCCCCCATCTTTATGAATGTTCATGGCTGTTGTACCATGCTTGGTCCCATGGAAAATGAGTTGAAGCAACCTAAAGTAGGAGTGCAGAGAAGACGGATAAAACCAACAGCTGAGAAGGCGAGGCCTGAAGAGCTTGATGAATCCAATGAAGTGGAAAAGGCAGATACTGACAAAAACATGATAACTATGTTTAATGTCATGAAGAAGAACACGAAAGGTGTTCCACTTGAAAGCCTCATTTTGAACAGGACATCTTTTGCTCAGACAGTGGAAAATTTGTTTACCTTATCATTTTTGGTTAAAGAAGGTCGTGCTAATATCCGTGTTGATGAAAATCGTTTGCACTATGTTGAACCTAAAAATGCTCCAAAGACGCAAGAAACGTACACTCATTTTGTGTTCAGATATGATTACCAAGACTGGAAGTTAATGAAGGACATGGTGCTTGAGGGTAAGGAGTTAATGCCACATAGAGGTCAGTTTTGCATTGTGATAGACTCTCAGCCAGAGATGGCTGGTGACAATTCTCAACCAGCTTTGTCTGTAACACCTATCAGGAAGTTATCACGGAATCGAGGGCGGACTGTGCAGGAGGATAGTGTTGTAGAAGAATCTCCTGGATGTGATGAAGAAAATGTTTCCAGAGCAGCTGCAGTCCGTAGGTGTAAACGTAAGCTTCATTAA 1122 0.426 MKGRSRRKIGVVEDEFRAVKRERLNENAEEEEHEQDPASRRIIRSQFLELKTLINDKRDNLMNTDSDKFDTILNELKKLHDQVQKPREQVADAEALLDLTHTLLGSVKSLLNEGITPAQFVGSLLKDYSQEGTENSIDWKKLGMVVSPIFMNVHGCCTMLGPMENELKQPKVGVQRRRIKPTAEKARPEELDESNEVEKADTDKNMITMFNVMKKNTKGVPLESLILNRTSFAQTVENLFTLSFLVKEGRANIRVDENRLHYVEPKNAPKTQETYTHFVFRYDYQDWKLMKDMVLEGKELMPHRGQFCIVIDSQPEMAGDNSQPALSVTPIRKLSRNRGRTVQEDSVVEESPGCDEENVSRAAAVRRCKRKLH* 374
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0330 373 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 24 358 - -
Lan20g0330 373 PANTHER UNCHARACTERIZED 24 358 IPR027786 GO:0005634|GO:0006281|GO:0030915
Lan20g0330 373 MobiDBLite consensus disorder prediction 171 197 - -
Lan20g0330 373 Pfam Nse4 C-terminal 220 294 IPR014854 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lan20g0330 Lan-Chr20 2273576 2276275 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0330 38 372 Non-SMC Element family AT1G51130 49.432 4.90e-106 316
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0330 K22825 - gmx:100792117 468.774
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0330 20 2273576 2276275 Lan4g1570 4 24733786 24736776 LSH