Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0308 ATGTTATCAGCTATATTAAGGCGAATTATGTCACCCTGTTGGAGTCCATTTGATGCGGGTGAAAGTTCAAGTAGAAATGTAGAATCTAGTGGTCGCTTTGTTGGTTTATTGTGGCATAAAGATTCGGGAAGACACCTGAATGGTGAATTCTCAATGGCAGTAGTTCAAGCAAACAATTTGTTGGAGGATCATAGCCAACTCGAATCAGGCCCCCTGTGCTCCGTTGCAGCAAGTCCTCAGGGAACTTATGTCGGTATATACGATGGGCATGGAGGTCCAGAAGCTGCCCGGTTTGTCAATGACCACCTATTTAAAAATATAAAGAAATTTACTTCAGAAAATCAAGGAATGTCAGCTGATGTTATCACTAAAGCATTCTTGGCAACAGAAGAAGAGTTCCTCTCTATAGTAAAGAAGCAGTGGGTACATAAGCCACAAATAGCATCAGTTGGAGCTTGCGTTCTGGTAGGCGTAATATGTAGCGGGCATCTCTATATTGCGAACGCAGGAGACTCTCGAGCAGTGTTAGGTAGACGGGATTTTGCCACAAAAGAGATTAAAGCTGTTCAGTTATCCTATGAGCACAATGCTAGCTTTGAATCTGTCCGAGATGAGTTACGCTCATTACACCCTGATGATCCGCATATTGTAGTTATGAAGCACAAGGTCTGGCGTGTGAAGGGACTGATCCAGGTTTCAAGATCAATTGGTGATGCATATCTAAAGAAGGCAGAGTTTAACAAAGCACCACTTTTGCCAAAATTTAGACTCTCACAATCCTTTGAGCAACCAATCCTTAAAGCCGAACCAACAATACTCGAACAGAAACTTCACCCCGAAGACCAGTTTCTTATATTTGCATCAGATGGGTTATGGGAGCACATTACAAATGAAAAAGCAGTTGACATTGTGCACAACAGTCCTCGTAATGGAGTCGCAAAGAAACTTATCAAAACTGCACTTTGTGAAGCTGCAAAGAAGAGAGAAATGAGATACTCAGACTTGAAAAAGATTGATAGAGGGGTGAGAAGACATTTCCATGATGACATCACAGTTATAGTCTTGTTTCTCAATTCGCATATAATCAGTCGTTCTATTTTACGAGGGCCTATTGTTTCGATCAAAGGGGCGGGAGGTGGTGGTGTCGGTAGTGGTATTGTAGCCTAG 1167 0.4225 MLSAILRRIMSPCWSPFDAGESSSRNVESSGRFVGLLWHKDSGRHLNGEFSMAVVQANNLLEDHSQLESGPLCSVAASPQGTYVGIYDGHGGPEAARFVNDHLFKNIKKFTSENQGMSADVITKAFLATEEEFLSIVKKQWVHKPQIASVGACVLVGVICSGHLYIANAGDSRAVLGRRDFATKEIKAVQLSYEHNASFESVRDELRSLHPDDPHIVVMKHKVWRVKGLIQVSRSIGDAYLKKAEFNKAPLLPKFRLSQSFEQPILKAEPTILEQKLHPEDQFLIFASDGLWEHITNEKAVDIVHNSPRNGVAKKLIKTALCEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVLFLNSHIISRSILRGPIVSIKGAGGGGVGSGIVA* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0308 388 PANTHER PROTEIN PHOSPHATASE 2C 38-RELATED 8 379 - -
Lan20g0308 388 PANTHER ALPHABET, ISOFORM E-RELATED 8 379 - -
Lan20g0308 388 ProSiteProfiles PPM-type phosphatase domain profile. 49 357 IPR001932 -
Lan20g0308 388 SMART PP2C_4 39 355 IPR001932 -
Lan20g0308 388 Gene3D - 36 365 IPR036457 -
Lan20g0308 388 Pfam Protein phosphatase 2C 76 327 IPR001932 -
Lan20g0308 388 ProSitePatterns PPM-type phosphatase domain signature. 83 91 IPR000222 GO:0043169
Lan20g0308 388 SUPERFAMILY PP2C-like 77 358 IPR036457 -
Lan20g0308 388 CDD PP2Cc 78 357 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0308 Lan-Chr20 2085984 2089314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0308 3 378 PP2C-type Phosphatase Gene Family AT3G12620 72.944 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0308 K01102 - pop:7458624 591.652