Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0283 ATGGAACTCGCCGGAATCACGCGCCGCCCTGCTTCCAATGAGTCTCCGACTCTCGGGCAACTCCTCAAGCACGTTGGAGACGTGCAAAAAGAAGCCTCCGGCGATGGCAGGGAGACTCCGGTGCACCATGCACTAGACATCTCTGATGGTGGCGATGGAAATGAACCTCGTGCGGTTCCGTTTGTTCTTTCCTTTAGCAACCTTACATACAGCGTTAAGATTCCATGGAAGTTGAGTTTTTCTGCATTGTTTCCAAACCGACGGCGCCAACTTGGTGCAGCAGCGGTGGCGGTGGAGCCCACGGTCGGAGAGAGTATGTTTACACGGACTAAGACTCTGTTGAATGATATCTCCGGTGAAGCACGTGACGGCGAGATCATGGCTGTGCTCGGCGCTAGTGGTTCCGGAAAATCGACACTTATCGACGCGCTGGCGAATAGAATTGCTAAGGGAAAGTTGAAAGGAACCTTGGCGCTGAACGGCGAAGCATTGGGATCGCGGCTTCTGAAGGTTATCTCTGCGTACGTGATGCAAGACGATCTTCTCTTTCCAATGCTCACCGTCGAAGAAACCCTCACCTTCGCCGCCGAATTCCGCTTACCACGTACTCTCTCAAAATCAAAGAAAAAGGCTCGTGTCCAAGCCCTAATCGACCAGCTAGGACTCCGAAACGCCGCCAAAACCATTATCGGAGACGAAGGCCACCGTGGAGTCTCCGGCGGTGAGCGGCGTAGAGTCTCTATCGGAACCGACATCATCCACGATCCTATCCTCCTTTTCTTAGACGAACCAACCTCTGGACTTGACTCCACAAGCGCGTTCATGGTGGTGAAGGTTCTTCAAAGAATCGCACAAAGTGGAAGCATTGTTATCATGTCAGTTCACCAACCAAGTTACCGAATCCTTAGCCTTCTCGATCGCATGATCTTCTTATCTCGCGGCCAAACCGTTTACAGCGGTTCGCCGTCGCAGTTGCCGTCATTCTTCGCCGAGTTCGGCCACCCTATACCCGATACTGAGAACCGAACCGAGTTCGCATTGGACCTAATTCGCGACCTAGAAGGTTCCACTGGTGGAACAAAAACCTTAGTAGAATTCAATAACTCATGGCATAGCATGAAGAAACTACAACACCATGACCAAAACGGCATGTCATTGAAGGAAGCTATAAGCGCAAGCATTTCAAGAGGGAAACTAGTTTCCGGTGCAACAAACACTACTACTAAAACGAACCCATCGTCTATGGTGCCATCTTTCGCAAACCCGTTTTGGATTGAAATGGTGACACTTTCGAAACGTTCCTTCTTAAACTCGAAGAGGATGCCAGAGTTGTTTGGAATGAGATTAGGTACAGTGATGGTAACAGGGTTCATTCTTGCAACCATGTTTTGGCAACTTGATAATTCACCAAAAGGGGTTCAAGAAAGGCTTGGTTTCTTTGCTTTTGCTATGTCCACCACTTACTACACCACCGCTGATGCACTCCCTGTGTTCCTTCAAGAGCGTTACATTTTCATGAGAGAGACTGCATACAATGCTTATCGAAGATCCTCGTACCTTGTCTCTCATGCTCTTGTTTCTTTACCTGCTTTAGTGTTCCTCTCTTTAGCTTTTGCTTCAATCACTTTTTGGGCTGTGGGGCTTGATGGTGGATTTTCAGGGTTCTTGTTTTACTTTCTTATTATCCTTGCTTCATTCTGGGCTGGGAACTCCTTTGTCACATTCCTTTCTGGCGTGGTTCCACATGTTATGCTTGGTTACACAATCGTTGTTGCTATTCTTGCATACTTCTTGCTCTTCAGTGGTTTCTTCATCAACAGAGACAGAATTCCAAGCTATTGGATTTGGTTTCATTACTTATCTTTGGTGAAGTATCCATATGAGGGTGTACTTCAGAACGAGTTTGATAACCATTACAAGTGTTTTGTGAAAGGGGTGCAGATATTTGACAATACCCCACTTGGGTCAGTGCCTAATGCAATAAAGTTGAAGCTTTTGGAGAGCATGAGTAAGACACTGGGAACAAGTATAACTAGCTCCACATGCTTGACAACGGGTGCAGATATATTGCAGCAGAATGGGGTTACAGAATTGAGCAAGTGGAATTGTTTGTGGCTCACAGTGGCTTGGGGTTTCTTCTTCAGGTTTCTCTTCTATGTGTCATTGTTGGTGGGGAGCAAGAACAAGAGGAGCTAA 2196 0.4731 MELAGITRRPASNESPTLGQLLKHVGDVQKEASGDGRETPVHHALDISDGGDGNEPRAVPFVLSFSNLTYSVKIPWKLSFSALFPNRRRQLGAAAVAVEPTVGESMFTRTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKGKLKGTLALNGEALGSRLLKVISAYVMQDDLLFPMLTVEETLTFAAEFRLPRTLSKSKKKARVQALIDQLGLRNAAKTIIGDEGHRGVSGGERRRVSIGTDIIHDPILLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSVHQPSYRILSLLDRMIFLSRGQTVYSGSPSQLPSFFAEFGHPIPDTENRTEFALDLIRDLEGSTGGTKTLVEFNNSWHSMKKLQHHDQNGMSLKEAISASISRGKLVSGATNTTTKTNPSSMVPSFANPFWIEMVTLSKRSFLNSKRMPELFGMRLGTVMVTGFILATMFWQLDNSPKGVQERLGFFAFAMSTTYYTTADALPVFLQERYIFMRETAYNAYRRSSYLVSHALVSLPALVFLSLAFASITFWAVGLDGGFSGFLFYFLIILASFWAGNSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPSYWIWFHYLSLVKYPYEGVLQNEFDNHYKCFVKGVQIFDNTPLGSVPNAIKLKLLESMSKTLGTSITSSTCLTTGADILQQNGVTELSKWNCLWLTVAWGFFFRFLFYVSLLVGSKNKRS* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0283 731 MobiDBLite consensus disorder prediction 30 51 - -
Lan20g0283 731 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 329 IPR027417 -
Lan20g0283 731 PANTHER ABC TRANSPORTER G FAMILY MEMBER 16 15 724 - -
Lan20g0283 731 Pfam ABC-2 type transporter 428 635 IPR013525 GO:0016020|GO:0140359
Lan20g0283 731 ProSitePatterns ABC transporters family signature. 238 252 IPR017871 GO:0005524
Lan20g0283 731 Gene3D - 104 329 IPR027417 -
Lan20g0283 731 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 15 724 - -
Lan20g0283 731 Pfam ABC transporter 114 266 IPR003439 GO:0005524
Lan20g0283 731 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 96 338 IPR003439 GO:0005524
Lan20g0283 731 SMART AAA_5 123 315 IPR003593 -
Lan20g0283 731 MobiDBLite consensus disorder prediction 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0283 Lan-Chr20 1927831 1930250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0283 113 325 Calmodulin-binding Proteins AT2G36910 28.182 2.13e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0283 K05681 - gmx:100803658 1231.47