Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0270 ATGCATGTAACTCCACCTTTCACTTATTACGATAAGAACTACTTTGAAGGCTACGCAAACCTTGGTGTCCATGAAGACATGATCAAGGATACTGTTCGCACTAATACTTATAGGGATGCAATCATGTTTCATCGCCCTTCTATTGAAGGAAAAGTTGTAATTGATGTTGGCTGCGGCACTGGCATTCTTTCTATATTTTGTGCTCAAGCTGGTGCCAAGAGGGTGTATGCTATTGAGGCCAGTGACATTGCCATGCAGGCAAGACTTGTTGTTGAGACAAATAATCTTTCCAATATCATCACCGTATTGCATGGAAGAGTTGAGGATGTTCAAATCACAGAACGGGTAGATGTTATCGTTTCAGAATGGATGGGATATATGCTTCTATATGAGAGCATGCTTGAAAGTGTTATAATTGCCAGAGATCGCTGGCTCAAACATGGAGGTCTAATGCTTCCTTCAGATGCAACGTTATACATGGCTCCTGTCACAAATATAGAAGTATACAGAAAAAGCACTGACTTCTGGGGCGACGTTTATGGAATTGATATGTCTCCCATTATACCATTATCAAAGAAGTCTGCATTTGAAGAACCTTCTCTGGAGATAATCACTAGTGAAAACCTTTTGACATGGCCAATAGAGATAAAACGTTTAGACTGTCATTCAGTTACGATTCCTCAGATACAATCTATAACAAAAGAGTTTCAGTTGGCATCATTGTTTGAAGCTCCACTGCATGGTTTTGCATTTTGGTTTGATGTTGAATTTAATGGGCCTGTACTAGAACCAACGCCAATCACTTGGGTACCATCAACTTCATCTGTTGATGATCATCAAGAAGAGGAGGAGGAGGAAGATAGTAGGAAGAGAAAAAGGGGGACAGAGCTTAGTGCAGCACCGATCCTGTCCACTGCTCCTGAAGACCCTGAAACACATTGGAAACAGACCTTGATATACTTGCATGATCCAATAGAGCTGGAAAAATATCAGATTATCAAAGGATCTTTAAAGCTGTCACAAAATGAAGATTGTGCCCGGTCTTTAGATGTCCACTTGGAATATGCTTCAGGTGGTCAAAGCTATGTGAAAGAAACTAGTCTTTTCTTGTTATAG 1116 0.4041 MHVTPPFTYYDKNYFEGYANLGVHEDMIKDTVRTNTYRDAIMFHRPSIEGKVVIDVGCGTGILSIFCAQAGAKRVYAIEASDIAMQARLVVETNNLSNIITVLHGRVEDVQITERVDVIVSEWMGYMLLYESMLESVIIARDRWLKHGGLMLPSDATLYMAPVTNIEVYRKSTDFWGDVYGIDMSPIIPLSKKSAFEEPSLEIITSENLLTWPIEIKRLDCHSVTIPQIQSITKEFQLASLFEAPLHGFAFWFDVEFNGPVLEPTPITWVPSTSSVDDHQEEEEEEDSRKRKRGTELSAAPILSTAPEDPETHWKQTLIYLHDPIELEKYQIIKGSLKLSQNEDCARSLDVHLEYASGGQSYVKETSLFLL* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0270 371 MobiDBLite consensus disorder prediction 268 308 - -
Lan20g0270 371 Pfam Ribosomal protein L11 methyltransferase (PrmA) 49 123 - -
Lan20g0270 371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 360 IPR029063 -
Lan20g0270 371 Gene3D Vaccinia Virus protein VP39 8 153 IPR029063 -
Lan20g0270 371 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 4 366 IPR025799 GO:0016274|GO:0018216
Lan20g0270 371 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 11 369 IPR025799 GO:0016274|GO:0018216
Lan20g0270 371 PANTHER BNAC03G41340D PROTEIN 4 366 - -
Lan20g0270 371 CDD AdoMet_MTases 53 152 - -
Lan20g0270 371 Gene3D - 155 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0270 Lan-Chr20 1829583 1833943 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0270 11 353 C2H2 Transcription Factor Family AT3G12270 35.000 3.42e-59 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0270 K11437 - gmx:100809174 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0270 20 1829583 1833943 Lan20g0270 20 1829583 1833943 ECH