Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan20g0265 | ATGTCTGAGACATCTACTGTATCGCCAGTCTTTCAGTCCATTAAATCGTTGCCACCGAAGTTCAAGTTTACTAATAATTCAAGCCCAGGTCTTGTGGGAAAACATGGAAATGGTAAATTGACAAGTGTTGCTCCAATTGGATCAAGTAGTTCTGGAAATAGTGTGCTAGTTGGGGAGGATTCGAACAAAGTTCAGGGCCGTGCTGGTGGCATGGATATTTTTGATGAGGACTCGCCATATGGTGGAAAAGGTAGTTCATTAGAAGACAGGCCATTGGATGCTGATGTTTCACTGCCTCTCCCATCAAGTTCAACATCCTCTAGGGAGAGCAAGTGGAATGATACAACTCCTTATGCTTCAAAGAAGAAGCTTCAGTCTTGGTTTCAACTTTCAAATGGGAATTGGGAGCTGGTGAAGATAATAACAACTTCTGGAACTGAATCTGTCATTACACTGTCTGATGGGAAGCTTTCAAAGGTTAAAGACGAAACTTTGGTACCGGCAAATCCTGATATTCTTGACGGAGTGGATGATCTCATGCAACTTAGTTATTTAAACGAACCATCAGTCTTATACAACCTGCAATATAGATACAATCAAAATATGATTTATACAAAAGCAGGCCCTGTTTTGGTTGCTATAAATCCCTTTAAGAAAGTTCCTCTGTATGGTAATGATTATATTGAAGCCTACAAGCGTAAAGCAATTGAAAGCCCTCATGTATATGCCATAACAGACACAGCCATGCGAGAAATGATGCGGGATGAAGTTAATCAATCTATTATTATAAGTGGTGAGAGTGGAGCAGGGAAGACTGAGACAGCAAAAATAGCAATGCAATACTTGGCCACCCTTGGAGGTGGAAGTGGAATAGAGTATGAGATATTAAAGACCAATCCAATACTAGAAGCGTTTGGTAATGGGAAAACATTGAGAAATGACAACTCAAGTCGTTTTGGAAAGCTCATTGAGATTCACTTCAGTGAAACTGGAAAAATATCCGGTGCTAATATTCAAACATTTTTGCTGGAAAAGTCTAGAGTAGTCCAATGCAATGAAGGGGAAAGGTCATATCATATATTTTATCAGCTATGTGCTGGAGCACCATCCTCTCTCAGGGAGAAGCTAAATCTACAAAGTGTGGAGGACTATAAATATCTAAATCAGAGCAATTGTTATTCAATTACTGGTGTTAATGATGCAGAAGAATTTCGTATAGTCAAGGAAGCTCTGGATGTTGTCCACATTAGCAAAGAAGACCAGGAGAATGTATTTGCAATGCTTGCTGCAGTTTTATGGTTAGGGAACATATCATTTGCTGTGGTTGATAATGAAAATCATGTTCAAGCTGTTGAAGATGAGGGGCTGTTGAGCGTTGCCAAGTTGATTGGCTGTGATATTGAAGACCTCAAGTTGACTTTATCAACTCGAAAAATGAAAGTTGGTAATGATAATATCGTCCAAAAGTTAACTCTATCTCAGGCTATTGATGCAAGAGATGCTTTGGCAAAGTCAATATATGCATGTTTGTTTGATTGGCTGGTTGAACAAATAAACAAATCACTTGCTGTTGGCAAAAGACGCACAGGCAGATCAATCAGCATTCTAGATATATATGGCTTTGAATCATTCAATAGAAACAGTTTTGAGCAGTTCTGCATAAACTATGCAAATGAAAGATTACAACAACACTTCAATCGTCATTTATTCAAGTTAGAACAGGAGGAATATATACAAGATGGCATCGATTGGGCTAAAGTTGAATTTGAGGACAACCAAGGCTGCCTTAATCTTTTTGAAAAGAAACCACTGGGGTTACTATCCCTGTTAGACGAGGAGTCCACATTCCCAAATGGCACAGATTTAACATTTGCCAACAAGCTTAAGCAGCATTTGAATTCTAATTCATGCTTCAAAGGAGAACGAGACAGAGCCTTTACTGTGTCTCATTATGCAGGGGAGGTCACTTATGATACAACTGGATTCTTGGAAAAGAACCGGGACCTATTGCACTTGGACTCCATCCAGCTTCTCTCCTCAAGCACATGTCATCTTCCTCAGATATTTGCATCCCAAATGCTTACTCAGTCTGAGAAGCCTGTAGTTGGTGCCTTACACAAGTCAGGTGGGGCAGATTCCCAAAAGCTAAGTGTTGCCACGAAATTCAAGGGTCAATTATTCCAACTGATGCAACGATTAGAAATCACTACCCCACATTTCATTCGCTGCATTAAGCCCAATAACCTCCAATCACCAGGATCGTATGAGCAAGGACTCGTGCTGCAGCAATTGAGATGTTGTGGAGTCCTGGAAGTGGTTCGAATATCAAAATCAGGCTTTCCAACTAGAATGTCTCACCAAAAGTTTGCCAGAAGATATGGTTTTCTTCTCCTTGAGAATGTGGCATCTCAGGATCCACTTAGTGTCTCTGTTGCAATTCTTCATCAGTTTAACATTTTGCCTGAGATGTATCAAGTTGGCTACACAAAATTATTTTTCAGAACAGGGCAGATTGGAGTGCTTGAAGATACTCGAAATCGTACTCTCCATGGCATTCTACGTGTGCAAAGTTCTTTCAGGGGTTACCGAGCTCGTTGTTACCGCAAGGAGCTTTCAGGAGGAATCACTATCCTTCAGTCATTTATTAGAGGAGAGAGAAGCAGAAAGGGGTATGTAGCTTTACTTCAGAGATATAGAGCTGCTGTTGTTATACAGAAGTGGATGAAAATGGTTTTTTCAAGAATCAGACTGAAGGCTGCTAATGATGCCGTAGTTGTTATACAATCATTCATTCGTGGTTCGTTAGTCAGAAAATGCTCAGGAGATATTGGATTGTTGAAATCCGGAGGCTTGAAGACTAGCGAGTCAGGTGAGGTTCTGGTAAAGTCATCTTTCCTAGCAGAATTACAGCGCCGGGTACTTAAGGCTGAAGCTGCCCTGAGAGAGAAAGAAGAAGAAAACGACATCCTTCACCAACGTCTTCAACAGTATGAGAGCAGATGGTCTGAGTATGAATTAAAGATGAAATCCATGGAAGAAGTGTGGCAGAAACAAATGAGATCATTACAATCTAGCCTCTCCATTGCAAAGAAGAGCCTTGCTATGGACGACTCCGAAAGAAATTCAGATGCATCTGTGAATGCAAGTGAAGAGAGGGAATACAGCTGGGACATGGAAAGTAATCACAGGCGCCAAGAAAGCAATGGGGCGAGATCAATGAGTGCCGGTTTGAGTGTTATAAGTCGAATGGCTGAAGAATTTGAGCAGAGAAGTCAAGTATTTGGCGATGATGCCAAGTTCTTGGTTGAGGTAAAATCTGGTCAAATTGAAGCAAGTTTGAGCCCTGACAGAGAGCTTAGAAGGTTAAAACAGATGTTTGAAGCATGGAAAAAGGATTATGGTTCAAGACTGCGTGAAACCAAAGTCATTTTACATAAACTTGGAAGTGAAGATGGTTCAGCTGAGAAAGCGAAGAAGAAATGGTGGGCGCGAAGGAATAGTACACGGATAAATTGA | 3516 | 0.4073 | MSETSTVSPVFQSIKSLPPKFKFTNNSSPGLVGKHGNGKLTSVAPIGSSSSGNSVLVGEDSNKVQGRAGGMDIFDEDSPYGGKGSSLEDRPLDADVSLPLPSSSTSSRESKWNDTTPYASKKKLQSWFQLSNGNWELVKIITTSGTESVITLSDGKLSKVKDETLVPANPDILDGVDDLMQLSYLNEPSVLYNLQYRYNQNMIYTKAGPVLVAINPFKKVPLYGNDYIEAYKRKAIESPHVYAITDTAMREMMRDEVNQSIIISGESGAGKTETAKIAMQYLATLGGGSGIEYEILKTNPILEAFGNGKTLRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCNEGERSYHIFYQLCAGAPSSLREKLNLQSVEDYKYLNQSNCYSITGVNDAEEFRIVKEALDVVHISKEDQENVFAMLAAVLWLGNISFAVVDNENHVQAVEDEGLLSVAKLIGCDIEDLKLTLSTRKMKVGNDNIVQKLTLSQAIDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQGCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFKGERDRAFTVSHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSSTCHLPQIFASQMLTQSEKPVVGALHKSGGADSQKLSVATKFKGQLFQLMQRLEITTPHFIRCIKPNNLQSPGSYEQGLVLQQLRCCGVLEVVRISKSGFPTRMSHQKFARRYGFLLLENVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSSFRGYRARCYRKELSGGITILQSFIRGERSRKGYVALLQRYRAAVVIQKWMKMVFSRIRLKAANDAVVVIQSFIRGSLVRKCSGDIGLLKSGGLKTSESGEVLVKSSFLAELQRRVLKAEAALREKEEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAMDDSERNSDASVNASEEREYSWDMESNHRRQESNGARSMSAGLSVISRMAEEFEQRSQVFGDDAKFLVEVKSGQIEASLSPDRELRRLKQMFEAWKKDYGSRLRETKVILHKLGSEDGSAEKAKKKWWARRNSTRIN* | 1172 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan20g0265 | 1171 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 121 | 170 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Lan20g0265 | 1171 | MobiDBLite | consensus disorder prediction | 1033 | 1066 | - | - | |
| Lan20g0265 | 1171 | ProSiteProfiles | Myosin motor domain profile. | 174 | 846 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lan20g0265 | 1171 | Gene3D | - | 542 | 736 | - | - | |
| Lan20g0265 | 1171 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 148 | 895 | IPR027417 | - | |
| Lan20g0265 | 1171 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 417 | 714 | - | - | |
| Lan20g0265 | 1171 | ProSiteProfiles | IQ motif profile. | 850 | 876 | IPR000048 | GO:0005515 | |
| Lan20g0265 | 1171 | Gene3D | - | 356 | 415 | - | - | |
| Lan20g0265 | 1171 | ProSiteProfiles | IQ motif profile. | 871 | 900 | IPR000048 | GO:0005515 | |
| Lan20g0265 | 1171 | SMART | MYSc_2a | 168 | 847 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 |
Showing 1 to 10 of 34 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan20g0265 | - | - | gmx:100801124 | 2015.74 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lan20g0265 | 20 | 1800523 | 1812921 | Lan20g0265 | 20 | 1800523 | 1812921 | ECH |
Showing 1 to 1 of 1 entries