Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0265 ATGTCTGAGACATCTACTGTATCGCCAGTCTTTCAGTCCATTAAATCGTTGCCACCGAAGTTCAAGTTTACTAATAATTCAAGCCCAGGTCTTGTGGGAAAACATGGAAATGGTAAATTGACAAGTGTTGCTCCAATTGGATCAAGTAGTTCTGGAAATAGTGTGCTAGTTGGGGAGGATTCGAACAAAGTTCAGGGCCGTGCTGGTGGCATGGATATTTTTGATGAGGACTCGCCATATGGTGGAAAAGGTAGTTCATTAGAAGACAGGCCATTGGATGCTGATGTTTCACTGCCTCTCCCATCAAGTTCAACATCCTCTAGGGAGAGCAAGTGGAATGATACAACTCCTTATGCTTCAAAGAAGAAGCTTCAGTCTTGGTTTCAACTTTCAAATGGGAATTGGGAGCTGGTGAAGATAATAACAACTTCTGGAACTGAATCTGTCATTACACTGTCTGATGGGAAGCTTTCAAAGGTTAAAGACGAAACTTTGGTACCGGCAAATCCTGATATTCTTGACGGAGTGGATGATCTCATGCAACTTAGTTATTTAAACGAACCATCAGTCTTATACAACCTGCAATATAGATACAATCAAAATATGATTTATACAAAAGCAGGCCCTGTTTTGGTTGCTATAAATCCCTTTAAGAAAGTTCCTCTGTATGGTAATGATTATATTGAAGCCTACAAGCGTAAAGCAATTGAAAGCCCTCATGTATATGCCATAACAGACACAGCCATGCGAGAAATGATGCGGGATGAAGTTAATCAATCTATTATTATAAGTGGTGAGAGTGGAGCAGGGAAGACTGAGACAGCAAAAATAGCAATGCAATACTTGGCCACCCTTGGAGGTGGAAGTGGAATAGAGTATGAGATATTAAAGACCAATCCAATACTAGAAGCGTTTGGTAATGGGAAAACATTGAGAAATGACAACTCAAGTCGTTTTGGAAAGCTCATTGAGATTCACTTCAGTGAAACTGGAAAAATATCCGGTGCTAATATTCAAACATTTTTGCTGGAAAAGTCTAGAGTAGTCCAATGCAATGAAGGGGAAAGGTCATATCATATATTTTATCAGCTATGTGCTGGAGCACCATCCTCTCTCAGGGAGAAGCTAAATCTACAAAGTGTGGAGGACTATAAATATCTAAATCAGAGCAATTGTTATTCAATTACTGGTGTTAATGATGCAGAAGAATTTCGTATAGTCAAGGAAGCTCTGGATGTTGTCCACATTAGCAAAGAAGACCAGGAGAATGTATTTGCAATGCTTGCTGCAGTTTTATGGTTAGGGAACATATCATTTGCTGTGGTTGATAATGAAAATCATGTTCAAGCTGTTGAAGATGAGGGGCTGTTGAGCGTTGCCAAGTTGATTGGCTGTGATATTGAAGACCTCAAGTTGACTTTATCAACTCGAAAAATGAAAGTTGGTAATGATAATATCGTCCAAAAGTTAACTCTATCTCAGGCTATTGATGCAAGAGATGCTTTGGCAAAGTCAATATATGCATGTTTGTTTGATTGGCTGGTTGAACAAATAAACAAATCACTTGCTGTTGGCAAAAGACGCACAGGCAGATCAATCAGCATTCTAGATATATATGGCTTTGAATCATTCAATAGAAACAGTTTTGAGCAGTTCTGCATAAACTATGCAAATGAAAGATTACAACAACACTTCAATCGTCATTTATTCAAGTTAGAACAGGAGGAATATATACAAGATGGCATCGATTGGGCTAAAGTTGAATTTGAGGACAACCAAGGCTGCCTTAATCTTTTTGAAAAGAAACCACTGGGGTTACTATCCCTGTTAGACGAGGAGTCCACATTCCCAAATGGCACAGATTTAACATTTGCCAACAAGCTTAAGCAGCATTTGAATTCTAATTCATGCTTCAAAGGAGAACGAGACAGAGCCTTTACTGTGTCTCATTATGCAGGGGAGGTCACTTATGATACAACTGGATTCTTGGAAAAGAACCGGGACCTATTGCACTTGGACTCCATCCAGCTTCTCTCCTCAAGCACATGTCATCTTCCTCAGATATTTGCATCCCAAATGCTTACTCAGTCTGAGAAGCCTGTAGTTGGTGCCTTACACAAGTCAGGTGGGGCAGATTCCCAAAAGCTAAGTGTTGCCACGAAATTCAAGGGTCAATTATTCCAACTGATGCAACGATTAGAAATCACTACCCCACATTTCATTCGCTGCATTAAGCCCAATAACCTCCAATCACCAGGATCGTATGAGCAAGGACTCGTGCTGCAGCAATTGAGATGTTGTGGAGTCCTGGAAGTGGTTCGAATATCAAAATCAGGCTTTCCAACTAGAATGTCTCACCAAAAGTTTGCCAGAAGATATGGTTTTCTTCTCCTTGAGAATGTGGCATCTCAGGATCCACTTAGTGTCTCTGTTGCAATTCTTCATCAGTTTAACATTTTGCCTGAGATGTATCAAGTTGGCTACACAAAATTATTTTTCAGAACAGGGCAGATTGGAGTGCTTGAAGATACTCGAAATCGTACTCTCCATGGCATTCTACGTGTGCAAAGTTCTTTCAGGGGTTACCGAGCTCGTTGTTACCGCAAGGAGCTTTCAGGAGGAATCACTATCCTTCAGTCATTTATTAGAGGAGAGAGAAGCAGAAAGGGGTATGTAGCTTTACTTCAGAGATATAGAGCTGCTGTTGTTATACAGAAGTGGATGAAAATGGTTTTTTCAAGAATCAGACTGAAGGCTGCTAATGATGCCGTAGTTGTTATACAATCATTCATTCGTGGTTCGTTAGTCAGAAAATGCTCAGGAGATATTGGATTGTTGAAATCCGGAGGCTTGAAGACTAGCGAGTCAGGTGAGGTTCTGGTAAAGTCATCTTTCCTAGCAGAATTACAGCGCCGGGTACTTAAGGCTGAAGCTGCCCTGAGAGAGAAAGAAGAAGAAAACGACATCCTTCACCAACGTCTTCAACAGTATGAGAGCAGATGGTCTGAGTATGAATTAAAGATGAAATCCATGGAAGAAGTGTGGCAGAAACAAATGAGATCATTACAATCTAGCCTCTCCATTGCAAAGAAGAGCCTTGCTATGGACGACTCCGAAAGAAATTCAGATGCATCTGTGAATGCAAGTGAAGAGAGGGAATACAGCTGGGACATGGAAAGTAATCACAGGCGCCAAGAAAGCAATGGGGCGAGATCAATGAGTGCCGGTTTGAGTGTTATAAGTCGAATGGCTGAAGAATTTGAGCAGAGAAGTCAAGTATTTGGCGATGATGCCAAGTTCTTGGTTGAGGTAAAATCTGGTCAAATTGAAGCAAGTTTGAGCCCTGACAGAGAGCTTAGAAGGTTAAAACAGATGTTTGAAGCATGGAAAAAGGATTATGGTTCAAGACTGCGTGAAACCAAAGTCATTTTACATAAACTTGGAAGTGAAGATGGTTCAGCTGAGAAAGCGAAGAAGAAATGGTGGGCGCGAAGGAATAGTACACGGATAAATTGA 3516 0.4073 MSETSTVSPVFQSIKSLPPKFKFTNNSSPGLVGKHGNGKLTSVAPIGSSSSGNSVLVGEDSNKVQGRAGGMDIFDEDSPYGGKGSSLEDRPLDADVSLPLPSSSTSSRESKWNDTTPYASKKKLQSWFQLSNGNWELVKIITTSGTESVITLSDGKLSKVKDETLVPANPDILDGVDDLMQLSYLNEPSVLYNLQYRYNQNMIYTKAGPVLVAINPFKKVPLYGNDYIEAYKRKAIESPHVYAITDTAMREMMRDEVNQSIIISGESGAGKTETAKIAMQYLATLGGGSGIEYEILKTNPILEAFGNGKTLRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCNEGERSYHIFYQLCAGAPSSLREKLNLQSVEDYKYLNQSNCYSITGVNDAEEFRIVKEALDVVHISKEDQENVFAMLAAVLWLGNISFAVVDNENHVQAVEDEGLLSVAKLIGCDIEDLKLTLSTRKMKVGNDNIVQKLTLSQAIDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQGCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFKGERDRAFTVSHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSSTCHLPQIFASQMLTQSEKPVVGALHKSGGADSQKLSVATKFKGQLFQLMQRLEITTPHFIRCIKPNNLQSPGSYEQGLVLQQLRCCGVLEVVRISKSGFPTRMSHQKFARRYGFLLLENVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSSFRGYRARCYRKELSGGITILQSFIRGERSRKGYVALLQRYRAAVVIQKWMKMVFSRIRLKAANDAVVVIQSFIRGSLVRKCSGDIGLLKSGGLKTSESGEVLVKSSFLAELQRRVLKAEAALREKEEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAMDDSERNSDASVNASEEREYSWDMESNHRRQESNGARSMSAGLSVISRMAEEFEQRSQVFGDDAKFLVEVKSGQIEASLSPDRELRRLKQMFEAWKKDYGSRLRETKVILHKLGSEDGSAEKAKKKWWARRNSTRIN* 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0265 1171 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 121 170 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lan20g0265 1171 MobiDBLite consensus disorder prediction 1033 1066 - -
Lan20g0265 1171 ProSiteProfiles Myosin motor domain profile. 174 846 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan20g0265 1171 Gene3D - 542 736 - -
Lan20g0265 1171 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 895 IPR027417 -
Lan20g0265 1171 Gene3D Myosin VI head, motor domain, U50 subdomain 417 714 - -
Lan20g0265 1171 ProSiteProfiles IQ motif profile. 850 876 IPR000048 GO:0005515
Lan20g0265 1171 Gene3D - 356 415 - -
Lan20g0265 1171 ProSiteProfiles IQ motif profile. 871 900 IPR000048 GO:0005515
Lan20g0265 1171 SMART MYSc_2a 168 847 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan20g0265 1171 MobiDBLite consensus disorder prediction 18 115 - -
Lan20g0265 1171 Gene3D - 897 940 - -
Lan20g0265 1171 SMART iq_5 919 941 IPR000048 GO:0005515
Lan20g0265 1171 SMART iq_5 870 892 IPR000048 GO:0005515
Lan20g0265 1171 SMART iq_5 847 869 IPR000048 GO:0005515
Lan20g0265 1171 SMART iq_5 896 918 IPR000048 GO:0005515
Lan20g0265 1171 PRINTS Myosin heavy chain signature 204 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan20g0265 1171 PRINTS Myosin heavy chain signature 258 283 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan20g0265 1171 PRINTS Myosin heavy chain signature 300 327 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan20g0265 1171 PRINTS Myosin heavy chain signature 532 560 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan20g0265 1171 PRINTS Myosin heavy chain signature 585 613 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan20g0265 1171 Pfam Myosin head (motor domain) 176 834 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan20g0265 1171 MobiDBLite consensus disorder prediction 18 32 - -
Lan20g0265 1171 MobiDBLite consensus disorder prediction 1033 1072 - -
Lan20g0265 1171 Coils Coil 966 1014 - -
Lan20g0265 1171 MobiDBLite consensus disorder prediction 98 115 - -
Lan20g0265 1171 Pfam IQ calmodulin-binding motif 922 938 IPR000048 GO:0005515
Lan20g0265 1171 PANTHER MYOSIN 9 1171 - -
Lan20g0265 1171 MobiDBLite consensus disorder prediction 42 60 - -
Lan20g0265 1171 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 9 1171 - -
Lan20g0265 1171 CDD MYSc_Myo8 188 834 IPR036022 -
Lan20g0265 1171 Gene3D - 779 891 - -
Lan20g0265 1171 ProSiteProfiles IQ motif profile. 920 949 IPR000048 GO:0005515
Lan20g0265 1171 Gene3D Kinesin motor domain 177 775 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0265 Lan-Chr20 1800523 1812921 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0265 7 1169 Myosins gene family AT1G50360 75.320 0.0 1793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0265 - - gmx:100801124 2015.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0265 20 1800523 1812921 Lan20g0265 20 1800523 1812921 ECH