Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0262 ATGTCTAACTCTGACGGCACCACTAACGGCGTCACCAACATTGACCCGAACCAACGCCACACCCTCTCCGCCAAGAAACCTCCTTCCAAGGACCGTCACACCAAAGTCGACGGCCGTGGCCGCCGCATACGCATGCCAATCATATGCGCCGCACGTGTCTTCCAGCTCACACGTGAGCTAGGTCACAAGTCTGACGGCCAAACCATCGAGTGGCTCCTCCGTCAAGCTGAGCCTTCAATTATCGCCGCCACCGGCACCGGTACCACTCCGGCCACCTTCTCTTCTCTTTCTGTTTCTCTCCGTTCCTCTGCTAACTCTCTCTCATCTCCTTCGTCTACTTCCGATCATAAATCTCTACTCTCTACTACTCCGTTCATTCTCGGAAAGCGTATACGCACCGATGACGATGCTTCTGTAACCGCTAAAGACGATGTCGTTTCTGCTGCCCCTGCTGGACTTTGGGCTCTACCTGCTAGGCATGATTTTGGACAGATTTGGAGCTTCGCTGCTGCGGCGGCTCCTCCGCCGGAGATGGTGTCAGTTTCTCAGCAGCAACAAGCTTCTTTCTTCCTTCATCATCCGCAGCACCAGCACCAGCAGCAACAAGCAGCTATGGGAGAAGCTTCGGCGGCAAGGCTGGGGAATTACCTTCCTGGTCATCTGAATTTGCTAGCTTCGTTGTCCGGAGGACATGGAAATAACGGTCGGAGAGACGATGAGCATCATTAA 729 0.5418 MSNSDGTTNGVTNIDPNQRHTLSAKKPPSKDRHTKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPATFSSLSVSLRSSANSLSSPSSTSDHKSLLSTTPFILGKRIRTDDDASVTAKDDVVSAAPAGLWALPARHDFGQIWSFAAAAAPPPEMVSVSQQQQASFFLHHPQHQHQQQQAAMGEASAARLGNYLPGHLNLLASLSGGHGNNGRRDDEHH* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0262 242 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 239 - -
Lan20g0262 242 MobiDBLite consensus disorder prediction 1 42 - -
Lan20g0262 242 MobiDBLite consensus disorder prediction 24 42 - -
Lan20g0262 242 MobiDBLite consensus disorder prediction 1 23 - -
Lan20g0262 242 ProSiteProfiles TCP domain profile. 29 83 IPR017887 -
Lan20g0262 242 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 239 IPR005333 GO:0003700
Lan20g0262 242 Pfam TCP family transcription factor 29 169 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0262 Lan-Chr20 1779200 1780890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0262 17 240 TCP Transcription Factor Family AT5G23280 64.957 1.25e-92 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan20g0262 TCP 3.7e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0262 K16221 - gmx:100799005 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0262 20 1779200 1780890 Lan4g1621 4 25123980 25125690 LSH