Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0258 ATGATGTTAATGCATTGTCATGAATTGTGTAAACCAGTTTCAATGATGATTGGAGTTAACTTAGCTCTAGCTTTTGTCAATATACTTCTGAAGAAGGTTCTTAATGAAGGAGTGGATTACATGTCTGTTCTAACATATAGACAAGTAGTTTCATTTATCTTCATGGCACCACTTGCATGCTTCTATGAAAGGAAACAGAAACTAGAGGCTCCAATTATATGTCTCCTTTTCCTCAGTGCACTTATCGGAGTAACAATGAGCCAGTGCCTATTTCTTCTTGGACTTGGATATACATCTGCCACATTTGCATGTGCATTCCTCAACATGGTGCCTGTGTTTACATTCATCATGGCACTGCCATTTGGGATAGAGAAGGTGAACATAAGAAGCAAGGGTGGTAAAGCCAAAGTGTTGGGAACTTTTGTGAGCATTGGTGGAGCTTTATTATTGGTCCTTTATAAAGGAATACCCTTAACCAACCCACAATCACATCAGCACTTAGAAAACAAAGTTACAAGTGCACCAGCAACAGCCACATTAGAGAAAAGGATCATAGGTTCAATACTTTTGATTGCAGGATGCATCTTATGGTCTTCATGGTTTATCATACAAGCAAAGATTAGCAAAAAGTATCCATGCAAATACTCTAGCACAGCTATTTTATCACTTTTTGCTGCTATTCAATCAGCATTATTGAACTTGATCATGAACAGAAATATTGCCTCCTGGATTATCAAAGGAAAGATAGAAATATTGACTGTTATATATGCTGGGTTGGTTGGGTCAGGCTTATGCTATGTGGCAATGTCATGGTGTGTCAAACAAAGAGGACCAGTTTTCACAGCAGCATTTACCCCTCTTTTACAGATATATGTGGCTGTGTTTGATTTCTGTATATTGAAGGAAGAAATTTACATGGGAAGTGTTGCAGGATCTGTGTTGGTTATTGGTGGCATGTATGTTCTTTTATGGGGGAAAAGTAAAGAGGGGGAGCAATATATCATGAAGGATACTCAAGCAAATGAACAAGATGTAGAATGTCAAGAGCAATGCCCAAAATCATAA 1065 0.3803 MMLMHCHELCKPVSMMIGVNLALAFVNILLKKVLNEGVDYMSVLTYRQVVSFIFMAPLACFYERKQKLEAPIICLLFLSALIGVTMSQCLFLLGLGYTSATFACAFLNMVPVFTFIMALPFGIEKVNIRSKGGKAKVLGTFVSIGGALLLVLYKGIPLTNPQSHQHLENKVTSAPATATLEKRIIGSILLIAGCILWSSWFIIQAKISKKYPCKYSSTAILSLFAAIQSALLNLIMNRNIASWIIKGKIEILTVIYAGLVGSGLCYVAMSWCVKQRGPVFTAAFTPLLQIYVAVFDFCILKEEIYMGSVAGSVLVIGGMYVLLWGKSKEGEQYIMKDTQANEQDVECQEQCPKS* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0258 354 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020|GO:0016021
Lan20g0258 354 Pfam EamA-like transporter family 13 151 IPR000620 GO:0016020|GO:0016021
Lan20g0258 354 PANTHER WAT1-RELATED PROTEIN 11 350 - -
Lan20g0258 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
Lan20g0258 354 PANTHER WAT1-RELATED PROTEIN 11 350 IPR030184 GO:0016021|GO:0022857
Lan20g0258 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0258 Lan-Chr20 1765063 1767266 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0258 12 331 Nodulin-like Gene Family AT1G11460 40.123 1.41e-77 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0258 - - gmx:100806247 556.984