LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan20g0255	ATGCAGGATAACAACGAGAGCAGCGGCACCGGGTTTCATCACCATGCCACGGCGGCGCAATCCCGCCAACACCGCCACAAGCTACAAGTTTACAATGAGGTTCTCCGCCGTCTCAAGGATTCCGGCAACGACGAAGCTATGCAACCTGGCTTCGATGATCAGCTTTGGGCTCACTTCAACCGTCTACCTACACGGTATGCGCTGGATGTGAATGTGGAAAGGGCTGCAGATGTTCTTATGCACAAAAGATTACTGCATTTGGCTCATGATCCTGCTAACAGGCCTGCAATTGAAGTTCGATTAGTCCAGGTTCACCCAATATCGGATGGAAACTCAACTGACTCTGTCGTATCAGATGTTCCTGGGAAAGAATCTGGTCAAAGCTCTTCAAAGTTCTCAAACAGACTGGGTTTACATCCACCTCCTGCTTTTGGTTCTTCTCCTAATCTTGAAGCACTAGCACTTGAAGCAAATAATTCTGAAGATATAGAGGAGGAACAATCTGTGAATACTAGTGCACAATATTCACGGCCCATGCATGAAATTACCTTCTCAACAGATGACAAGCCAAAGCTTCTTAGTCAGTTAACTGCTTTGCTTGCTGAAATTGGACTGAACATCCAAGAGGCGCATGCTTTCTCCACAACCGACGGTTACTCATTAGATGTATTTGTTGTTGAAGGATGGCCCTATGAGGAAACAGAGAAGCTTAAAGCAACTTTGGGAAGAGAAGTATTAGTGATTGAGCGGCAGGCATGGTCGGGTCAGCAATCAGAATCTTCTGTTGAGAAGCCTGATCAAGCAGAGGTGAAATGTGAACCTGATCAGTTGACAATACCTAATGATGGGATGGATGTTTGGGAAATAGATCCTAAACATTTGAAATATGGAACTCAAATTGCGTCTGGGTCATATGGTGAACTATTTAAAGGTATATATTGCAGCCAAGAAGTAGCCATTAAAGTTCTCAAGGCTGAGCATATAAATTCAGATCTGCAGACAGAGTTCGCGCAAGAAGTGTATATCATGAGAAAGGTTCGACACAAGAACGTCGTACAATTCATAGGAGCATGTACAAAGCCCCCACGCTTGTGCATTGTTACAGAATTTATGTCTGGTGGAAGTGTGTATGACTATCTACATAAGCAGAAGGGTTGCTTTAAATTTCCTACACTGCTCAAAGTTGCAATTGATATTTCTAAAGGAATGAACTACTTGCACCAACATGACATAATCCATAGAGACTTGAAGGGTGCCAATCTTTTGATGGACGAAAATGGTGTTGTAAAGGTTGCTGATTTTGGGGTAGCTAGAGTGAAATCTCAATCCGGAGTTATGACAGCAGAAACTGGAACATATCGATGGATGTCTCCTGAGGTTATAGAACACAAGCCGTATGATCACAAGGCTGATGTATTTAGTTTTGGAGTTGTTTTATGGGAATTGCTAACTGGAAAGATTCCATACGAATACCTGACCCCTCTACAGGCTGCTATAGGAGTGGTTCAAAAGGGTCTACGACCAACCATCCCTAAGAACACCCATCCAAAGTTTGTTGAGCTTCTTGATAGGTCTTGGCAGCAAGATCCAGCACTGAGACCCGATTTCCCCGAGATTATCGAGATCCTGCAGCAGTTAGCCAAGGAGGTCGGAGATGAAGGAGAGGAGCGGCGCAGGGATAAACCAGGAGGAGGATTTCTGTCTGTCCTGAGACGAGATTAA	1722	0.4437	MQDNNESSGTGFHHHATAAQSRQHRHKLQVYNEVLRRLKDSGNDEAMQPGFDDQLWAHFNRLPTRYALDVNVERAADVLMHKRLLHLAHDPANRPAIEVRLVQVHPISDGNSTDSVVSDVPGKESGQSSSKFSNRLGLHPPPAFGSSPNLEALALEANNSEDIEEEQSVNTSAQYSRPMHEITFSTDDKPKLLSQLTALLAEIGLNIQEAHAFSTTDGYSLDVFVVEGWPYEETEKLKATLGREVLVIERQAWSGQQSESSVEKPDQAEVKCEPDQLTIPNDGMDVWEIDPKHLKYGTQIASGSYGELFKGIYCSQEVAIKVLKAEHINSDLQTEFAQEVYIMRKVRHKNVVQFIGACTKPPRLCIVTEFMSGGSVYDYLHKQKGCFKFPTLLKVAIDISKGMNYLHQHDIIHRDLKGANLLMDENGVVKVADFGVARVKSQSGVMTAETGTYRWMSPEVIEHKPYDHKADVFSFGVVLWELLTGKIPYEYLTPLQAAIGVVQKGLRPTIPKNTHPKFVELLDRSWQQDPALRPDFPEIIEILQQLAKEVGDEGEERRRDKPGGGFLSVLRRD*	574

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lan20g0255	573	MobiDBLite	consensus disorder prediction	1	17	-	-
Lan20g0255	573	MobiDBLite	consensus disorder prediction	108	148	-	-
Lan20g0255	573	SUPERFAMILY	ACT-like	179	243	IPR045865	-
Lan20g0255	573	Pfam	Protein tyrosine and serine/threonine kinase	294	543	IPR001245	GO:0004672\|GO:0006468
Lan20g0255	573	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	411	423	IPR008271	GO:0004672\|GO:0006468
Lan20g0255	573	PANTHER	SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1	13	557	-	-
Lan20g0255	573	SUPERFAMILY	Protein kinase-like (PK-like)	279	543	IPR011009	-
Lan20g0255	573	Gene3D	Phosphorylase Kinase; domain 1	283	372	-	-
Lan20g0255	573	Gene3D	Transferase(Phosphotransferase) domain 1	373	561	-	-
Lan20g0255	573	PANTHER	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	13	557	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan20g0255	Lan-Chr20	1739936	1747225	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan20g0255	17	566	MAP Kinase Kinase Kinase	AT4G35780	65.636	0.0	728

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-4	Lan20g0255		PK_Tyr_Ser-Thr	9.8e-71	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan20g0255	-		-	gmx:100805180	957.977

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan8g0629	8	8554645	8561503	Lan20g0255	20	1739936	1747225	LSH
	Lan20g0255	20	1739936	1747225	Lan4g1630	4	25201960	25208998	LSH

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