Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0254 ATGCATTCTGTAACAAAATCATTGAAATCTTATAACAAACATTCTAGAAAGTTCTCTCTTACCAGAAACACTGATTCCTCTTCCTCCGATCACGAGAACCTTCCTATTCTCCTCCACCAGGACAATAACCACTCTAACCCTTCCTCCGCCGTGTGCGACAATGCACAACATGAGAGCTTCGATTTCCGCCGTAAAGTTCAGCCGCCGTTGCCGGAGGAGGATCCGCCGTCGAGGCTGATTGGGAAGTTTCTGCATAAGCAGAGAGCTTCTGGTGACTTTTCGTTGGATATGGATTTGGAAATGGAGGAGCTTCAGGAGCATTATGCCGGCGACGGGAAAATGACGCCGGTTGAGGAGTCGCCGACGATGAACCACTACCGTATCTCTAGGGATGTAAAGGTTTCGTTCGAGGAACCTGCTCCGGTCGTGGTTGAGGTTGCAAACGATGACGTCGTTGGAAGTAAAAACAGTAAGGATTCGCCGTCGATCGGAGAGTTTCAACGACCGCCGCAACCTGATCGCCGTGGTGGAGCCCCGTATCACTCCGGTGACGGTGAGGTTTTGAGGTGCACCTCGAATGGTTCATTGGAAAGGAACCTTTCTATGCAGAGAAAGAGTTCTTTGTTAAAGGCAAAAACCCGGTCCAGATTGCTAGACCCGCCAGAAGAACCGGATAAGAGATCGGGCCGGGTTCCGAGATCGAGTCAGATGTTCTCCGGGTATATGGGAAAGAAGGGTGGTGATGATGAAGAGGATGATCCTTTCTTGGAAGATGATTTTCCAGATGAGTATAAAAAAACACATTTCAGCTTTTGGATTTTCCTTGAATGGTTGAGTTTGATTTTAATCATTGGTTTATTGATAACCACGCTAAGTGTTCCTCTTTTGAGTAACAAGAAACTGTGGCAGCTTAAGCTATGGAAATGGGAGGTGATGGTTTTGGTTTTGATATGTGGAAGGTTGGTCTCTGATTGGATGATTAGAATAGCTGTGTTTTTTATTGAAAGGAATTTCCTTTTGAGGAAGAGAGTGTTATACTTTGTGTATGGTGTGAAGAAGCCAGTTCAGAATTGTGTTTGGTTGGGTCTTGTTTTGATTGCATGGCATTTTTTGTTTGATAAGAGAGTTCAGAGGGAGACTACAAGTTCTTTTCTTGAATATGTGACTAGGATTTTGGTGTGCTTATTAGTGGGTACTTTGGTATGGTTGGTGAAAACACTTGCAGTTAAGGTTCTTGCATCTTCTTTCCATGTTAGCACATACTTCGATAGGATTCAAGAATCACTGTTTAATCAGTTTGTGATCGAAACGCTTTCGGGGCCGCCTTTGGTTGAACTTCAAAAGGCTGAAGAAGAGGAACAGAAGCTTGCTGAGGAGGTTCAAAAGCTGCAGAATGGTGGGGCTACCATACCCCCTGATCTTAGGGCAGCAACTGCTTTCTCTACCATAAAGAGTGGAAAGCTGAGAAGTGGAGTGCTTCAGAAAAGCCCTATGACATCACGCCCACTTTCAAAGAAATTAGATGATGGAAAGGGAGGAATAACTATTGATCATCTCCATAAGCTGAATCCGAATAATGTTTCTGCATGGAATATGAAAAGGTTGATTAATATGGTTCGGCATGGGGCTCTTACGACATTGGATGAGCAGATACTTGGTTCAGCTAATGAGGATGAGAATGCCACACAGATTAGGAGTGAAAATGAGGCCAAAGCAGCAGCAAAGAAAATATTTCAGAATGTTGCTAGGCACGGGTGCAGGTATATACGCGTGGATGACTTGATGCATTTTATGCGAGAAGATGAAGCTGAAAAGACGTTAAGTATGTTTGAAGGAGCATCTGATAGTGGGAAAATTAGCAAATCAGCCTTGAAGAACTGGGTGGTCAATGCTTTCAGAGAGAGGAGAGCACTTGCTTTGACATTAAATGACACTAAGACGGCAGTGAATAAACTTCACCGGATGCTCAACTTTTTAGTTATACTGATTATAGTGATTATTTGGCTCCTGATATTGCAAATCGCCACCACCAAACTTTTTCTCTTTGTGAGCTCACAAGTTGTCTTGGTTGCATTTATATTTGGAAATACCTGCAAGACCATATTTGAATCAATTATTTTCCTTTTTGTCTTGCACCCATTTGACGTGGGAGATAGATGTGAAATTGATGGGGTCCAGATGGTTGTAGAAGAGATGAACATTTTAACAACCATATTTCTGAGATATGATAATCAAAAGATTCTAATCCCTAACAGTGTCCTTGCTACTAAGGCCATAAGTAACTTCTACCGTAGTCCTGACATGGGAGATGCTATTGAATTCTGCATACATATATCTACCCCAATTGAAAGTATTTCAGCTGTGAAACACAGAATACAAAGTTACATCGATAACAAGAAGGAGCACTGGTATGCTTCACCTCTCATAGTATTCAAGGATTGTGAACAATTAAACATGATAAGATTGGCGATTTGGCCAACTCATAAAATGAATTTCCAAGACATGGGAGAAAGATTTGCGAGGAGATCCCTTTTGATTGAAGAGATGATCAAGATCTTCCAGGAGCTTGATTTGCAGTACCGTCTCCTACCACACGATATTAGCATTAGAAGCATGCCTACCACCTCTGACCGGCTTCCACCTAGTTGGGCAACAATAAAAAATTGA 2667 0.4256 MHSVTKSLKSYNKHSRKFSLTRNTDSSSSDHENLPILLHQDNNHSNPSSAVCDNAQHESFDFRRKVQPPLPEEDPPSRLIGKFLHKQRASGDFSLDMDLEMEELQEHYAGDGKMTPVEESPTMNHYRISRDVKVSFEEPAPVVVEVANDDVVGSKNSKDSPSIGEFQRPPQPDRRGGAPYHSGDGEVLRCTSNGSLERNLSMQRKSSLLKAKTRSRLLDPPEEPDKRSGRVPRSSQMFSGYMGKKGGDDEEDDPFLEDDFPDEYKKTHFSFWIFLEWLSLILIIGLLITTLSVPLLSNKKLWQLKLWKWEVMVLVLICGRLVSDWMIRIAVFFIERNFLLRKRVLYFVYGVKKPVQNCVWLGLVLIAWHFLFDKRVQRETTSSFLEYVTRILVCLLVGTLVWLVKTLAVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVELQKAEEEEQKLAEEVQKLQNGGATIPPDLRAATAFSTIKSGKLRSGVLQKSPMTSRPLSKKLDDGKGGITIDHLHKLNPNNVSAWNMKRLINMVRHGALTTLDEQILGSANEDENATQIRSENEAKAAAKKIFQNVARHGCRYIRVDDLMHFMREDEAEKTLSMFEGASDSGKISKSALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFLVILIIVIIWLLILQIATTKLFLFVSSQVVLVAFIFGNTCKTIFESIIFLFVLHPFDVGDRCEIDGVQMVVEEMNILTTIFLRYDNQKILIPNSVLATKAISNFYRSPDMGDAIEFCIHISTPIESISAVKHRIQSYIDNKKEHWYASPLIVFKDCEQLNMIRLAIWPTHKMNFQDMGERFARRSLLIEEMIKIFQELDLQYRLLPHDISIRSMPTTSDRLPPSWATIKN* 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0254 888 MobiDBLite consensus disorder prediction 215 230 - -
Lan20g0254 888 SUPERFAMILY Sm-like ribonucleoproteins 703 762 IPR010920 -
Lan20g0254 888 Gene3D - 713 762 IPR023408 -
Lan20g0254 888 PIRSF Memb_At2g17000 5 888 IPR016688 -
Lan20g0254 888 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 38 886 - -
Lan20g0254 888 Coils Coil 443 466 - -
Lan20g0254 888 MobiDBLite consensus disorder prediction 147 196 - -
Lan20g0254 888 Pfam Mechanosensitive ion channel 655 857 IPR006685 GO:0016020|GO:0055085
Lan20g0254 888 MobiDBLite consensus disorder prediction 1 33 - -
Lan20g0254 888 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 38 886 IPR016688 -
Lan20g0254 888 MobiDBLite consensus disorder prediction 211 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0254 Lan-Chr20 1734506 1738149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0254 45 885 Mechanosensitive Ion Channel Family AT1G78610 57.625 0.0 917
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0254 K22048 - gmx:102665658 1221.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0254 20 1734506 1738149 Lan4g1631 4 25208979 25217353 LSH