Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0243 ATGGGTAGTTGTGGAAGGGAAGGAGCAGTGAGGCAGTATATAAGGTCAAAGGTCCCTCGTTTAAGGTGGACTCATGACCTTCATCGTTGCTTTGTTCATGCCATTAACAGCCTTGGTGGTCATCACAAAGCTACTCCTAAGCTTGTTCTTCAGTTAATGGATGTCAAAGGCCTCACCATTTCACACGTCAAGAGCCATCTTCAGATGTATAGAAGCATGAGAGGTGACTTGGGCAGAAAAGGTAGGACATTCACCCAACATAGAAACCAATCTTTTGAGGACTATGATGGTTGTGTTGATGAAGTAAATGATGTTGTGGTTCACAACCCTACTTGCTCAAAAGCCATTGCAAAAGAATCTGATTCCCTCTTCAGCTACAGTAATCACTCCCCAAAAAGACCTAGAATTGACACAAGGAGTTGTTGCATCTCAAAGAGCCTACAATGCAGCCAAAGATTTTGTGATGTAGTGCCAAATACTTACCAATGCTTTTATGATATTGGAGAGAAGAAAACTGAGCACAATGGAATAAAGGAGACTGGTTACTGTACTGTTGATGGTTCAAGATTGCTGACACAACAACAGCAACCACATTTACACACACTGCTACCAGATCTTAGTAACCTCACTTCATTCGAATGTCCAAACCAAGAATCTAATTTCCTTCAGGTTACTAGATTACATGAAAACAAGACCACTTCACAGCATGGAGAAGATGAAAATGTAGGAAAATGTGAGTTGCTATTATCACTCCCATTGCTAAATCCTTCCCCTCAAGGGAGTAATGGTTCTTCAACAAGTGAGATGAGTGAGACAATTTCATCATGGCCTTGGTTCACCAACTACAAGGACTGCTCTAATATTTCAAGTGTCAAACATAGGATTAATTTGGATTTGTCTTTAGCCCTATGTGGAAATTGA 921 0.4072 MGSCGREGAVRQYIRSKVPRLRWTHDLHRCFVHAINSLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRGDLGRKGRTFTQHRNQSFEDYDGCVDEVNDVVVHNPTCSKAIAKESDSLFSYSNHSPKRPRIDTRSCCISKSLQCSQRFCDVVPNTYQCFYDIGEKKTEHNGIKETGYCTVDGSRLLTQQQQPHLHTLLPDLSNLTSFECPNQESNFLQVTRLHENKTTSQHGEDENVGKCELLLSLPLLNPSPQGSNGSSTSEMSETISSWPWFTNYKDCSNISSVKHRINLDLSLALCGN* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0243 306 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 306 IPR044848 GO:0003700
Lan20g0243 306 SUPERFAMILY Homeodomain-like 17 73 IPR009057 -
Lan20g0243 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Lan20g0243 306 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Lan20g0243 306 Gene3D - 18 74 - -
Lan20g0243 306 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0243 Lan-Chr20 1632659 1636271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0243 1 74 G2-like Transcription Factor Family AT1G14600 70.886 3.29e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan20g0243 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0243 - - gmx:100787188 332.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0643 8 8667365 8670567 Lan20g0243 20 1632659 1636271 LSH
Lan20g0243 20 1632659 1636271 Lan4g1649 4 25354015 25357433 LSH