Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0231 ATGGCAAGCTCTGTTTCAGAGAAGCAAGTAATGGTGATTGCAATTGATGACAGTGAACATAGCACATACGCATTGAAATGGACTCTTGATCACTTTTTCGTTCCAGTTACAAATCATATCTTCAAGCTTGTTCTTGTTCATGCCAAACCTTCTGCTACTTCTGCTGTTGGACTCGCTGGCCCTGTGTATGCAGGAGCTGCTGAAATTCTTCCTATTGTTGATTCCGATCTTAGAAAGATTGCTGCTAGAGTTATTGAATCTGCTAAACAAATTTGCTTCGACAAATCCGTAACGGATGTTATCGTGGAAGTGGTGGAAGGTGATCCTAGAAATGTTCTCTGTGAAGCTGTGGAGAAGCACCATGCTTCAATATTGGTTGTGGGTAGTCATGGTTATGGTGCTATAAAAAGGGCGGTTTTAGGTAGTGTGAGTGACTATTGTGCTCACCATGCTCACTCCAGTGTGATGATCGTGAAGAAACCAAAAACCAAACACTGA 498 0.4217 MASSVSEKQVMVIAIDDSEHSTYALKWTLDHFFVPVTNHIFKLVLVHAKPSATSAVGLAGPVYAGAAEILPIVDSDLRKIAARVIESAKQICFDKSVTDVIVEVVEGDPRNVLCEAVEKHHASILVVGSHGYGAIKRAVLGSVSDYCAHHAHSSVMIVKKPKTKH* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0231 165 PANTHER - 5 165 - -
Lan20g0231 165 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 12 161 - -
Lan20g0231 165 CDD USP_Like 11 158 - -
Lan20g0231 165 Gene3D HUPs 2 165 IPR014729 -
Lan20g0231 165 PRINTS Universal stress protein signature 8 26 IPR006015 -
Lan20g0231 165 PRINTS Universal stress protein signature 119 131 IPR006015 -
Lan20g0231 165 PRINTS Universal stress protein signature 137 159 IPR006015 -
Lan20g0231 165 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 5 165 - -
Lan20g0231 165 Pfam Universal stress protein family 10 159 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0231 Lan-Chr20 1555843 1557946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0231 21 147 Plant U-box Gene Family AT5G57035 27.536 3.36e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0231 - - qsu:112039192 264.618