Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0229 ATGGTTGAAACCCGTCGAAGCTCCTCTTCTTCAAAGCGCACTCTCTCTTCTCCTTCTCCTTCCACCGCCAAAAGATCCAAGGTTTCCGACGATGCCTCACCATCAACGCTTCACGCTCCGGGAACTGTTGCTCGCGGCAAAGAATCTGAAACCGGAAATGATTCCCGAGAATCGGAGCTCCGGTCTGCTGATCTGGCTGATACGGCGTCGTTGAAGCCGGTGGATGATTGTGACGAAGATAAGCCTCCTTCTGAGCCCGTTGAAGTCGAGGATTTGGTGTCCCCTCAGTGTCCAGGTGAAACTGCGCTGGATGCGGATAAATCCAAGGCAGCTGGTACAGCGGCAGGTAGGTCCAAGAAACGGGTGACTAAATCCACAAAACCGGTCCCCAAGGCTGCGTGGGGAAATCTCATTTCTCAGTGTTCTCAGAATCCTCACTTGTCCATGTTTGATCCTATCTTCACTGTTGGTCAAGGTCGTCAATGTAATTTATGGCTTAAAGATCCCTCTGTTGGTAATGTTTTGTGCAAGTTGAGCCACATAGAGCGTGGAGGTTCGTCTGTTGCATTACTGGAAATAACAGGGGGTAAAGGTTCTGTTCAAATCAATGGTAAGACACACCGGAAGAATGTCCGTCAAATTTTGAGTGGAGGTGATGAGGTGGTCTTCGGTTCTTCCGGAAAGCATGCTTATATCTTTCAGCCGCTCATGAATAATATTACTACTACTGGCGTACCTTCATCCGTGAGTACCTTTGAAGCCAAGGGAGCTCCAATAGATGGAATAAAATCTGAGCCTAGGTCTGGGGACTCTTCAGCTGTTTCTGGGGCATGCATATTGGCCACATTATCTGATCTCCATGAAGATTTATCACTCCTTTCACCAGCTGCAAAAACTGGCAAGAATGTCCAACAGAATACTGACATTTCATCACCTTCTGGGCACGGGGATGATATCCCAGACAATGAAATGAAGGCTATCACCAACAGTGATGGACCACCTGGAGGTGTTTCTGCTGAGAAAACTGTTCTTGCACCCTCTAATCCTGTTAATGAAAATCCCAGCCTAGACACCATGGATGTCGATGCAGATGCTGGGAAGATCACTGCTTCTTCCGAGTTGAGGTCATTATTGCGGATGCTTTCTGGTTCCTGTCCTGAACTTGATTTAAGCAGTAGCATTAACAAGATATTAAAGGAACGGTGGGAATTAAGAGAACTCCTTAAAGATGTTGATACTCCAACAATATTAGCATCAACCAAGCACCAAGCATTCAAGGACAGTTTACAACAAAGAATTCTCACTGCTGACAATATTGATGTCTCGTTCGAAAATTTTCCTTATTATCTAAGTGATACAACAAAGAATGTTTTGACTGCCTCTACATATATTCATTTGAAGTGCAATGGCTTTGGAAAACATGCTTCAGACCTCCCATCGGTGTCCCCAAGGATATTGTTATCCGGTCCTGCAGGTACGGAAATATATCAAGAGACTTTGTGCAAGGCACTTGCTAAGCATTTTGGCGCCAAGATATTAATTGTGGATTCTCTTTCCATACCTGGTGCAGTACCATCAAAGGAAGTTGATTCTGCCAAAGAAAGTTCAAGGCCTGAAAGACCATCTGTGTTTGCTAAGAGAAGTACCCAGGCCTCCACATTACCAAAGAAGAAACCAGCTTCTAGTGTTGATGCTGAAATTATGGGTGGATCTACATTAAGTTCTCAGGCTACCCTTAAGCAAGAGGTTTCTACTGCATCATCAAAAGGCAATACTCTTAAGACAGGTGATCGAGTAAAATTTGTTGGTAACATCCCTTCTGCTGTCTCATCGCTACAGAGCTATCCTTCAAGAGGGCCAAGCTATGGTTCCCGTGGTAAAGTTCTCCTTGCTTTTGAAGATAACGAGTCTTCAAAAATTGGAGTTAGGTTTGACAAATCAATTCAAGATGGTAATGATCTTGGAGGCCTTTGCGAAGATGATCATGGATTCTTTTGTTCTGCAAATCATTTACTACAAGTAGATGGTACCACAGGGGATGACATTGACAAGCTTGCAATTAATGACTTTTTTGAGGTTATCTGTAATCAGAGTAAAAGTGGTGCTCTAGTGTTGTTCATTAAGGATATAGAGAAGTCAATGGTTGGTAACTCTGAAATTTTGAAAAGTAAATTTGAAAACATGCCACAGAATGTTGTTGTAATTGGCTCACATACCCAGCTGGACAACCGTAAGGAAAAGACTCAACCAGGTGGCCTTCTATTTACAAAGTTTGGGAGCAATCAGACAGCACTACTCGATCTTGCTTTTCCGGATAACTTCAGTAGACTGCATGATAGGAGCAAAGAAACCCCCAAAGTAATGAAGCAACTTAATCGCCTTTTCCCAAACAGGGTGACAATACAACTGCCTCAGGATGAGGCTCTACTTTCTGATTGGAAGCAGCAACTAGAACGCGACATTGAGACTATGAAAGCCCAGTCCAACGTTATCAGCATTCGCTCAGTTCTCAACAAGATTGGATTGAATTGCTCTGACATCGAGTCACTTTGCATCAAAGATCAAACCCTAACAACCGAAAGTGTAGAGAAGATAATTGGCTGGGCTATAAGTTACCATTTTATGCAGTCATCTGAGTCTTCTAACAAAGACTCCAAGCTTGTGATATCTGCAGAAGGCATTAAGTATGGGCTAAATATTCTACAAGGCATTCAAAATGAAAACAAGAGCTCAAAAAAATCACTGAAGGATGTGGTAACTGAGAATGAATTTGAGAAAAAACTGCTTGGTGATGTTATTCCACCAACTGATATTGGGGTCACATTCGATGATATTGGAGCTTTAGAGAATGTGAAAGATACCTTGAAGGAATTGGTTATGCTTCCTCTTCAAAGGCCTGAATTGTTTTGCAAAGGACAATTGACAAAGCCTTGCAAGGGAATATTGCTTTTTGGCCCACCTGGCACTGGAAAAACAATGCTTGCAAAGGCTGTAGCAACTGAGGCTGGAGCAAATTTTATAAATATTTCAATGTCCAGCATTACTTCTAAGTGGTTTGGTGAAGGGGAAAAATATGTTAAAGCCGTCTTTTCTCTGGCCAGCAAAATTGCTCCAAGTGTTATTTTTGTTGATGAGGTTGACAGTATGCTAGGAAGACGTGAAAATCCTGGTGAGCACGAGGCTATGCGTAAAATGAAGAATGAGTTTATGGTTAATTGGGATGGTCTGCGTACCAAAGATAAAGAGCGTGTACTTGTTCTTGCTGCTACAAACCGACCTTTTGATCTTGATGAGGCTGTTATTAGGAGGCTTCCGCGCAGATTGATGGTTAATCTGCCAGATGCTCCTAACAGAGAAAAAATTATGAGAGTCATTTTAGCGAAAGAAGATTTGGCACTAGATGTTGATTTGGAAGCAATAGCAAATATGACAGATGGATATTCGGGTAGTGACCTGAAGAATCTGTGTGTTACAGCAGCACACTGCCCAATAAGAGAGATTTTAGAGAAGGAAAAGAAGGAGAGAAATTCAGCATTGGCTGAGAACAAGCCTTTACCTGTATTGTGTAGCAGTGCAGACATTCGTCCCTTGAAGATGGAGGATTTTAGATATGCACATGAGCAGGTTTGTGCCAGCGTGTCAACCGAATCATCAAATATGAATGAGCTACTCCAATGGAATGACCTTTACGGAGAAGGTGGATCGAGAAAAATGAGATCTTTGAGCTATTTCATGTAA 3738 0.4267 MVETRRSSSSSKRTLSSPSPSTAKRSKVSDDASPSTLHAPGTVARGKESETGNDSRESELRSADLADTASLKPVDDCDEDKPPSEPVEVEDLVSPQCPGETALDADKSKAAGTAAGRSKKRVTKSTKPVPKAAWGNLISQCSQNPHLSMFDPIFTVGQGRQCNLWLKDPSVGNVLCKLSHIERGGSSVALLEITGGKGSVQINGKTHRKNVRQILSGGDEVVFGSSGKHAYIFQPLMNNITTTGVPSSVSTFEAKGAPIDGIKSEPRSGDSSAVSGACILATLSDLHEDLSLLSPAAKTGKNVQQNTDISSPSGHGDDIPDNEMKAITNSDGPPGGVSAEKTVLAPSNPVNENPSLDTMDVDADAGKITASSELRSLLRMLSGSCPELDLSSSINKILKERWELRELLKDVDTPTILASTKHQAFKDSLQQRILTADNIDVSFENFPYYLSDTTKNVLTASTYIHLKCNGFGKHASDLPSVSPRILLSGPAGTEIYQETLCKALAKHFGAKILIVDSLSIPGAVPSKEVDSAKESSRPERPSVFAKRSTQASTLPKKKPASSVDAEIMGGSTLSSQATLKQEVSTASSKGNTLKTGDRVKFVGNIPSAVSSLQSYPSRGPSYGSRGKVLLAFEDNESSKIGVRFDKSIQDGNDLGGLCEDDHGFFCSANHLLQVDGTTGDDIDKLAINDFFEVICNQSKSGALVLFIKDIEKSMVGNSEILKSKFENMPQNVVVIGSHTQLDNRKEKTQPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKVMKQLNRLFPNRVTIQLPQDEALLSDWKQQLERDIETMKAQSNVISIRSVLNKIGLNCSDIESLCIKDQTLTTESVEKIIGWAISYHFMQSSESSNKDSKLVISAEGIKYGLNILQGIQNENKSSKKSLKDVVTENEFEKKLLGDVIPPTDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNREKIMRVILAKEDLALDVDLEAIANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKERNSALAENKPLPVLCSSADIRPLKMEDFRYAHEQVCASVSTESSNMNELLQWNDLYGEGGSRKMRSLSYFM* 1246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0229 1245 MobiDBLite consensus disorder prediction 297 313 - -
Lan20g0229 1245 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 1245 - -
Lan20g0229 1245 MobiDBLite consensus disorder prediction 49 63 - -
Lan20g0229 1245 Gene3D - 1113 1207 - -
Lan20g0229 1245 CDD AAA 979 1112 - -
Lan20g0229 1245 Gene3D - 133 241 - -
Lan20g0229 1245 SUPERFAMILY SMAD/FHA domain 141 227 IPR008984 GO:0005515
Lan20g0229 1245 Pfam ATPase family associated with various cellular activities (AAA) 981 1110 IPR003959 GO:0005524|GO:0016887
Lan20g0229 1245 MobiDBLite consensus disorder prediction 1 36 - -
Lan20g0229 1245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 940 1219 IPR027417 -
Lan20g0229 1245 ProSitePatterns AAA-protein family signature. 1084 1103 IPR003960 GO:0005524|GO:0016887
Lan20g0229 1245 MobiDBLite consensus disorder prediction 525 564 - -
Lan20g0229 1245 MobiDBLite consensus disorder prediction 542 557 - -
Lan20g0229 1245 Gene3D - 939 1218 IPR027417 -
Lan20g0229 1245 MobiDBLite consensus disorder prediction 1 128 - -
Lan20g0229 1245 Pfam AAA+ lid domain 1134 1170 IPR041569 -
Lan20g0229 1245 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 1245 - -
Lan20g0229 1245 MobiDBLite consensus disorder prediction 297 336 - -
Lan20g0229 1245 SMART AAA_5 977 1114 IPR003593 -
Lan20g0229 1245 CDD FHA 159 235 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0229 Lan-Chr20 1536651 1547978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0229 940 1192 Calmodulin-binding Proteins AT3G56690 38.462 1.49e-41 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0229 - - gmx:100801477 1929.84