Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0222 ATGGCTTTCAATTCCAGCACTGTTGTTGAGAGGATGGGGTTATCTTCAACACAAGATGCTGCTTCTGTAGATTCCGTGACTCTCTTTGTGCTTCTCCTTTGTTCTTGTATTCTCTTTGGCCATCTTCTTCAAAAGAGTAAATGGATGACTGAATCAGTTGTTGCCCTAATCATTGGCATTATTACTGGAATTATAATTCTACTGACAACTGGGGGGAAAAGTTCACGCATCTTAGTATTTGATGAAGATCTTTTCTTTATATATCTTCTTCCACCCATCATATTTAATGCAGGGTTCCAGGTGAAAAAGAAGCAATTCTTTAGGAACTTTTTGGCAATTATGTTGTATGGTGTTCTTGGCAGTCTAATATCATTTCTCATTGTGTCACTGGGTTCAATACAGTTATTCAAAATGTTGGACATCGATTTAGTGACTGTGGGAGACTATTTTGCACTTGGAGCAGTATTTTCAGCTACAGATTCTGTGTGCACATTACAGGTGCTTGATCAGGACGAGACGCCTCACTTATACAGTCTAGTCTTCGGTGAAGGCGTTGTCAATGATGCTACATCCGTGGTTCTTTTTAACGCTATCCAGAAACTCGATCTCTCACACATCACCCCAGCCAACATTACACAATTCATAGGCAACTTTTTATACTTATTCTTGACCAGCACATTGCTGGGAATAGTGGTTGGCTTGTTTAGTGCTTACCTGATAAAGAAGTTATATTTTGGAAGACATTCCACTGACAGAGAAATTGCTCTTATGATCCTGATGGCCTACTTTTCTTATATGTTGGCTGAACTTCTTGATTTAAGTGGGATCCTTACTGTGTTCTTTTGTGGAATTGTCATGTCTCACTACACATGGCATAATGTCACTGAGAATTCTAAAATCACAAGCAGGCACGCTTTCGCAACTTTCTCTTTAATCTCCGAGATTTTCATCTTCTTGTACGTTGGTATGGATGCCTTGGATATAGAGAAGTGGAGATTTGCTAGCAACAGCCCATGGACATTATTTGGAGCAAGTGCAATATTGCTTAGCTTGGTTCTACTAGGAAGAGCAGCTTTTGTGTTCCCACTATCATTTATAGCTAATTTATTCAGAAAGTCTAGAAATGACAAGATTGCATTTAAGCAGCAGTTCACCACATCAGGGCATACTCAAGTGCAAGGAAATGCTATCATGATCACTAGCACCATAACAGTTGTTCTCTTAACTAATGTGGTTGGTGGGTTACTAACCAAACCTCTAGTAAAGTTCTTGTTGGATCCACATGTGCATGTAGGAGGGAGTTCAATGTCATCTGGTTTATTTTCTGCTAAAAATCTACCTCTTCTAACAAATGGACAAGATATAGAATCTAGCATAGACACTGGAAACCCACTTGACTCAAGTAAAGTTGTTCATCAATATTGGAGAACATTTGATGATACTTTCATGCGCCCTGTATTTGGAGGCAGAGGATTTGTACCTATTATTCCTGCTTCAACAACAGAGGATAATATACATTAG 1521 0.3899 MAFNSSTVVERMGLSSTQDAASVDSVTLFVLLLCSCILFGHLLQKSKWMTESVVALIIGIITGIIILLTTGGKSSRILVFDEDLFFIYLLPPIIFNAGFQVKKKQFFRNFLAIMLYGVLGSLISFLIVSLGSIQLFKMLDIDLVTVGDYFALGAVFSATDSVCTLQVLDQDETPHLYSLVFGEGVVNDATSVVLFNAIQKLDLSHITPANITQFIGNFLYLFLTSTLLGIVVGLFSAYLIKKLYFGRHSTDREIALMILMAYFSYMLAELLDLSGILTVFFCGIVMSHYTWHNVTENSKITSRHAFATFSLISEIFIFLYVGMDALDIEKWRFASNSPWTLFGASAILLSLVLLGRAAFVFPLSFIANLFRKSRNDKIAFKQQFTTSGHTQVQGNAIMITSTITVVLLTNVVGGLLTKPLVKFLLDPHVHVGGSSMSSGLFSAKNLPLLTNGQDIESSIDTGNPLDSSKVVHQYWRTFDDTFMRPVFGGRGFVPIIPASTTEDNIH* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0222 506 Gene3D - 146 197 - -
Lan20g0222 506 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lan20g0222 506 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lan20g0222 506 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lan20g0222 506 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lan20g0222 506 PANTHER SODIUM/HYDROGEN EXCHANGER 383 505 IPR018422 GO:0006812|GO:0015299|GO:0016021
Lan20g0222 506 PANTHER SODIUM/HYDROGEN EXCHANGER 11 385 IPR018422 GO:0006812|GO:0015299|GO:0016021
Lan20g0222 506 Pfam Sodium/hydrogen exchanger family 30 421 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lan20g0222 506 PANTHER SODIUM/HYDROGEN EXCHANGER 11 385 - -
Lan20g0222 506 PANTHER SODIUM/HYDROGEN EXCHANGER 383 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0222 Lan-Chr20 1485444 1489841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0222 6 506 Antiporters AT3G05030 60.668 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0222 - K14724 zju:107426063 648.662