Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0213 ATGGGGTCATCGAAGCCATGGCTGTACCCTGCTCCAACTTATCGCAAATTAGATAGCTATTGGGATACGGATCAAGATTCTCCTGGTCCTCGTTGTGGTCACACTCTCACCGCCGTCGCTGCCACCAAGTTACACGGCCCTCGCTTAATTCTCTTTGGTGGCGCCACCGCTATTGAAGGAGGATCTTCATCTGCTCCTGGCATTCGATTAGCTGGAGTCACTAACTCTGTTCATTCTTATGATGTTTTAACAAGGAAATGGACTAGTATTAAACCCTCTGGAGATCCGCCCTCCCCTCGGGCTGCTCATGCTGCTGCCGTCGTTGGCACCATGGTTGTTTTTCAGGGTGGGATAGGTCCTGCTGGACATTCTACGGATGATCTCTATGTGCTTGACTTGACCAATGATAAGTACAAGTGGCACAGAGTCGTTGTACAAGGACAAGGACCTGGTCCTCGCTACGGCCATGCAATGGACTTGGTTGCACAGAGATATCTTGTTACTGTCAGCGGAAATGATGGTAAAAGAGTTGTATCTGATGCCTGGGCTTTGGATACGGCTCAAAAACCTTACATGTGGCAGAGGCTGAACCCAGAAGGTGATAAACCTTCTGCTAGAATGTATGCAACGGCTAGTGCCCGCTCCGATGGAATGTTTTTGCTGTGTGGTGGAAGAGACTCTTCTGGAGCACCACTATCAGACGCCTATGGACTGCTCATGCATAGGAATGGCCAGTGGGAGTGGACTCTTGCTCCTGGAGTTTCCCCTTCACCAAGGTATCAACATGCTGCGGTTTTTGTTGGTGCTCGATTGCATGTCACAGGAGGCGTTCTCAAGGGTGGACGAGCTGTGGAAGGTGAAGCATCCATTGCAGTGTTGGACACTGCTGCTGGGGTTTGGTTGGACAGAAATGGCATCGTGTCTTCCTCACGCACAAACAAAGGTCATGATTATGACCCTTCTTTGGAGCTTATGCGTCGCTGTCGCCATGCAGCAGCGGCTGTTGGTGCTCGTGTATATATCTATGGTGGTCTAAGAGGAGATACTCTACTGGATGATTTTGCAGTAGCTGAAAATTCTCCACCGCCTCAAACTGATGTCAATTCTCCCGTGTTAACATCTGAGAGAACTTCACCTATAACAAGCCCCAAACAGAATCAGTCTAACATGAATCATGACATAACACCAAGTTCGGAGGGTGGACCAGAAATTTCCTTTTCTGGTGGCATGGGAATGGACCAAAACTCCTTGGAAAAACTGAGAGTGGCATCAGCTGAAGAAGCTAAAGCAGCGACTGCTGTCTGGCAAAATTTGCAGGGTATACCAGATAGCCATGCTGAAGAAACATCAGTATCAGATGAGAACTCACAAGCTGCAGAAACAATTTCAGATGGAAGTGATACAGAGGGGGATGTTCGCCTTCATCCCAGAGCTGTTGTAGTTGCTAAAGAGACTATAGGCAGCTTAGGTGGATTGGTGAGACAGTTATCGCTGGACCAATTTGAAAATGAAAGCAGACGTATGGTTCCCATAAATAATGATTCGCCATATCCTACAAAAAAGTTCACAAGGCAGAAATCCCCTCAGGGTTTACACAAAAAGATAATTTCAAATTTGCTTAGGCCACGCAACTGGAAAGCTCCTGCTAACAGGCGGTTCTTCTTGGATCCTTATGAAGTCGGTGAGCTTTGCTATGCGGCTGAGCAAATATTTATGCACGAACCTACTGTTCTTCAGCTTAAAGCTCCGGTCAAAGTATTTGGTGATCTTCATGGTCAGTTTGGTGATATGATGCGGCTTTTTGATGAATATGGATTTCCTTCACCTGCAGGGGACATAACGTATATTGATTACCTTTTTTTGGGAGATTATGTTGATCGAGGACAACATAGCTTGGAAACTATCACCTTGCTACTTGCACTTAAGATTGAGTATCCCGATAATGTTCACTTGATACGTGGAAACCATGAAGCTGCTGACATAAATGCACTATTTGGTTTTCGTATAGAGTGCATTGAAAGAATGGGAGAAAATGATGGAATATGGGCATGGACACGATTCAATCAACTTTTTAACTATCTCCCACTTGCTGCTCTAATTGAAAAGAAAATTATTTGTATGCATGGTGGCATTGGAAGGTCTATCCATTCAGTAGAACAGATAGAAAAGCTTGAAAGGCCCATAACAATGGATGCAGGATCTATTATTTTAATGGACCTTCTGTGGTCTGACCCCACAGAAAATGACAGTGTAGAGGGTTTGAGACCAAATGCTAGAGGGCCTGGGCTTGTCACTTTTGGGCCTGACCGTGTCACCGAATTCTGCAAGAAAAATAAATTACAACTCATTATAAGAGCCCATGAATGTGTCATGGATGGTTTTGAGCGATTTGCGCAGGGACAATTAATCACACTTTTTTCTGCAACTAACTATTGTGGAACGGCAAACAATGCTGGAGCTATACTTGTAGTTGGTAGAGGCTTAGTTGTGGTTCCAAAATTAATTCATCCCATACCACCTCCCATCCAGTCTCCAGAGACATCTCCTGAACGTGTCATGGATGAGACATGGATGCAGGAGCTTAATATTCAGAGGCCACCAACTCCTACTAGGGGTAGACCACAGCCTGATCTTGACCGTGGCTCGCTAGCATACATATGA 2661 0.4558 MGSSKPWLYPAPTYRKLDSYWDTDQDSPGPRCGHTLTAVAATKLHGPRLILFGGATAIEGGSSSAPGIRLAGVTNSVHSYDVLTRKWTSIKPSGDPPSPRAAHAAAVVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKYKWHRVVVQGQGPGPRYGHAMDLVAQRYLVTVSGNDGKRVVSDAWALDTAQKPYMWQRLNPEGDKPSARMYATASARSDGMFLLCGGRDSSGAPLSDAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLKGGRAVEGEASIAVLDTAAGVWLDRNGIVSSSRTNKGHDYDPSLELMRRCRHAAAAVGARVYIYGGLRGDTLLDDFAVAENSPPPQTDVNSPVLTSERTSPITSPKQNQSNMNHDITPSSEGGPEISFSGGMGMDQNSLEKLRVASAEEAKAATAVWQNLQGIPDSHAEETSVSDENSQAAETISDGSDTEGDVRLHPRAVVVAKETIGSLGGLVRQLSLDQFENESRRMVPINNDSPYPTKKFTRQKSPQGLHKKIISNLLRPRNWKAPANRRFFLDPYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFGDMMRLFDEYGFPSPAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPDNVHLIRGNHEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPIPPPIQSPETSPERVMDETWMQELNIQRPPTPTRGRPQPDLDRGSLAYI* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0213 886 ProSitePatterns Serine/threonine specific protein phosphatases signature. 652 657 IPR006186 GO:0016787
Lan20g0213 886 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 4 886 - -
Lan20g0213 886 Pfam Calcineurin-like phosphoesterase 583 790 IPR004843 GO:0016787
Lan20g0213 886 MobiDBLite consensus disorder prediction 445 471 - -
Lan20g0213 886 Pfam Serine-threonine protein phosphatase N-terminal domain 534 581 IPR031675 -
Lan20g0213 886 Gene3D - 196 369 IPR015915 GO:0005515
Lan20g0213 886 SUPERFAMILY Metallo-dependent phosphatases 537 847 IPR029052 -
Lan20g0213 886 Gene3D - 512 861 IPR029052 -
Lan20g0213 886 PIRSF STPPP_BSU1 1 886 IPR012391 GO:0004721|GO:0009742
Lan20g0213 886 Gene3D - 11 195 IPR015915 GO:0005515
Lan20g0213 886 MobiDBLite consensus disorder prediction 359 412 - -
Lan20g0213 886 PRINTS Serine/threonine phosphatase family signature 583 610 IPR006186 GO:0016787
Lan20g0213 886 PRINTS Serine/threonine phosphatase family signature 618 645 IPR006186 GO:0016787
Lan20g0213 886 PRINTS Serine/threonine phosphatase family signature 651 675 IPR006186 GO:0016787
Lan20g0213 886 PRINTS Serine/threonine phosphatase family signature 689 715 IPR006186 GO:0016787
Lan20g0213 886 PRINTS Serine/threonine phosphatase family signature 719 746 IPR006186 GO:0016787
Lan20g0213 886 PRINTS Serine/threonine phosphatase family signature 779 799 IPR006186 GO:0016787
Lan20g0213 886 PRINTS Serine/threonine phosphatase family signature 801 817 IPR006186 GO:0016787
Lan20g0213 886 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 4 886 - -
Lan20g0213 886 SUPERFAMILY Kelch motif 74 357 IPR015915 GO:0005515
Lan20g0213 886 MobiDBLite consensus disorder prediction 445 464 - -
Lan20g0213 886 MobiDBLite consensus disorder prediction 361 402 - -
Lan20g0213 886 SMART pp2a_7 555 839 IPR006186 GO:0016787
Lan20g0213 886 Pfam Kelch motif 97 134 - -
Lan20g0213 886 MobiDBLite consensus disorder prediction 862 886 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0213 Lan-Chr20 1435507 1446395 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0213 544 782 Calmodulin-binding Proteins AT5G63870 30.435 2.64e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0213 K01090 - gmx:100805538 1630.92