Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan20g0206 | ATGGATAAAATAGCTGATTCCAATGGTGAAAACAAGCAGGATAGTAAGAGAGAATCATGTCATCATTCTATACTTCCTGCTGATTCCCCCACATCACTGGTTGAATTCCTGTCTGAGATTACAGAAAGTTCAAATGAATTAGGTTCAACAGAGGTGGATTGGAATGAAACTTTTGCAGATATGGTTGAGGAATTACTGTTGTCTAATTTGCGAGGAGTTTACCAGGGTGCAATCAAGCAGATTGTTGAATTGGGCTATACCGAAGACGTAGCTGAAAAGGCCCTTTCAAGGAAGGCCCTATACATACAGGAAGGAGACCCTGTCTCAAATGTTGTAAATGCTACATTGAATGTGTTGAAGGGTAAAAATGTTGCTACTTCAGACACTGTATTTGAAAATTTTCAGCACTTGCTATCTTACACCATGTTGGAGATGATCACGGTGCTTCGTCAATTCAGACCATCCCTAACAGTTGGTGAAGCAATGTGGTCTTTGCTGATATGTGATTTGAATGTTTCATCGGCATGCACAGTGGAAGATTTCCTGAATGTGGATTCCAATGAGGAAAGCTCTACCAGCCCTTCCATTCCCCAATTGAAGTCAGAGGTTCAAAGCTCTACTAGCCCTTCTTGTACTTCCCAGGAGTCATGCCCCACTCACAAGAAGTGCAAGCATGAAGCACCAACAATTGGGAAGCTCCAAAGTTCACCCAACAAGAAAAGCTCTTTAGCTTCAGAAAGGGTAAAGCCTGAGGAAGAGAATGATTCATTGCCAACCGTTTCAGGTAGACCCTTTGAAACTTCAGAGGATATATGTAAAGTAGGATCTATTTCTAAGGACCACAATATAAAAGAAATTGAATCACTTAGGCAGATTTATCTCCATATGGATAAAATATATAGGGCCTCCCGAAAAGGGGGTTTGACGACTGACAAAAAAATGGAACCACCATCTGATATTCATAATCAACAAATGAAAAGTGTCTCTTCAAACACAACAAGCAAGCAAGGAGTTTGTGCATCAGATGCAACGTTACCCGACACAATATCTTCATCTTCAATAGTGAATCCCAATATTTCAGCATCAGACACAATTTCCAAACCAAAATCTCAGCCAAACCCCTTTGATGCTCAGAAGACTCCTGATTACTATGCTGAAATTCCTTATGATGAGTCTCTGGGTAAGTATTTACCAAGAGACAAGAAGGATGAATGTATTTTGAAGTTAGTTCCTCGAATGCATTTATTGCAGGGTGAGCTGCAAAGCTGGATCAACTGGGCAAATAAAAAGATTATGCAGGTTACTGCTAGGGTTGGCAAGCTGCGGCCTGAGCTTAAAATGCTAAAGAAGGAGAAGCAAGAAGCCGAAAAGGATGCAATACTTTTTCAGGAGAATGCTGCGAAGATCTCTCAGGTGGATAATGCCACAGAGAATACTAAAAAGCTAATTGAGAGTACTACTTCTGATGCTCTCATCCTAGAGGTAGAAAACATGTTGCTAAGTGAGGAGTTGGATGCTGATAGGTTGTCACTTGAGAAGTCATTGACAAGGCATCAGCAAGCACTGAAGAGAGAGCAGACGGCTCTTAAAAAGGCAGAGTCTTTGGAAAGCGAGAATGCTTTGCATCGTGATGATCTCTCGAGAGATAAGCAGAAGTTATCCAAATTGCAACAGGAGCTTGACAAGGAGAAAATTCTTCTAACCAGGGTTGAGGGTAGAGTGAGAACAGAGGAAGCAGAGAAAGAAAAGCTGCTTGCACAGGTTGCATCTATCAGAAGGGAAGGGAAACAGCTAGCAGAACACATAAAAGCTGAGGAAGATAAGATCAGAAAAAAAGCAGCCTGTAAGTTGCAGAAATATGTAGATTTGATTGTAAAGCTTGAATCACAGTTGGAAGAAGTAAAACAAAAATCAGAGTCTGCAAAAACTGCAGCACTTCATAAAGGTGAGCCATCGGGGAGCAAGAAACCGTGCACGTCTAAAACCGTTGTGAGCTGCCAAGCCAAATCTGCTGCTAGAAGTTTTAGGCGGGAGCAGGAGTGTGTTATGTGCCTATCCGAGGAGGCGTCAGTAGTTTTTCTTCCATGTGCTCATGAGGTTCTGTGTCCAGCATGCAATAAGCTCCATGAGAAACAAAGGATGAAGGATTGCCCTTCATGTAGGACTCCTATCCAACACAGGATTCATGTTAGATTTGCAGCAGACCAGTGGAGAGTATAG | 2220 | 0.4194 | MDKIADSNGENKQDSKRESCHHSILPADSPTSLVEFLSEITESSNELGSTEVDWNETFADMVEELLLSNLRGVYQGAIKQIVELGYTEDVAEKALSRKALYIQEGDPVSNVVNATLNVLKGKNVATSDTVFENFQHLLSYTMLEMITVLRQFRPSLTVGEAMWSLLICDLNVSSACTVEDFLNVDSNEESSTSPSIPQLKSEVQSSTSPSCTSQESCPTHKKCKHEAPTIGKLQSSPNKKSSLASERVKPEEENDSLPTVSGRPFETSEDICKVGSISKDHNIKEIESLRQIYLHMDKIYRASRKGGLTTDKKMEPPSDIHNQQMKSVSSNTTSKQGVCASDATLPDTISSSSIVNPNISASDTISKPKSQPNPFDAQKTPDYYAEIPYDESLGKYLPRDKKDECILKLVPRMHLLQGELQSWINWANKKIMQVTARVGKLRPELKMLKKEKQEAEKDAILFQENAAKISQVDNATENTKKLIESTTSDALILEVENMLLSEELDADRLSLEKSLTRHQQALKREQTALKKAESLESENALHRDDLSRDKQKLSKLQQELDKEKILLTRVEGRVRTEEAEKEKLLAQVASIRREGKQLAEHIKAEEDKIRKKAACKLQKYVDLIVKLESQLEEVKQKSESAKTAALHKGEPSGSKKPCTSKTVVSCQAKSAARSFRREQECVMCLSEEASVVFLPCAHEVLCPACNKLHEKQRMKDCPSCRTPIQHRIHVRFAADQWRV* | 740 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan20g0206 | 739 | Pfam | Family of unknown function (DUF6592) | 69 | 178 | IPR046527 | - | |
| Lan20g0206 | 739 | MobiDBLite | consensus disorder prediction | 320 | 338 | - | - | |
| Lan20g0206 | 739 | ProSiteProfiles | Zinc finger RING-type profile. | 681 | 721 | IPR001841 | - | |
| Lan20g0206 | 739 | MobiDBLite | consensus disorder prediction | 639 | 659 | - | - | |
| Lan20g0206 | 739 | MobiDBLite | consensus disorder prediction | 187 | 265 | - | - | |
| Lan20g0206 | 739 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Lan20g0206 | 739 | PANTHER | OS05G0141500 PROTEIN | 13 | 733 | IPR046934 | - | |
| Lan20g0206 | 739 | Pfam | Zinc finger, C3HC4 type (RING finger) | 678 | 726 | - | - | |
| Lan20g0206 | 739 | Coils | Coil | 445 | 465 | - | - | |
| Lan20g0206 | 739 | MobiDBLite | consensus disorder prediction | 350 | 380 | - | - | |
| Lan20g0206 | 739 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 659 | 732 | IPR013083 | - | |
| Lan20g0206 | 739 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RF298-RELATED | 13 | 733 | - | - | |
| Lan20g0206 | 739 | Coils | Coil | 617 | 644 | - | - | |
| Lan20g0206 | 739 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
| Lan20g0206 | 739 | MobiDBLite | consensus disorder prediction | 350 | 377 | - | - | |
| Lan20g0206 | 739 | Coils | Coil | 515 | 594 | - | - | |
| Lan20g0206 | 739 | MobiDBLite | consensus disorder prediction | 187 | 217 | - | - | |
| Lan20g0206 | 739 | SUPERFAMILY | RING/U-box | 677 | 727 | - | - | |
| Lan20g0206 | 739 | MobiDBLite | consensus disorder prediction | 306 | 338 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan20g0206 | Lan-Chr20 | 1383262 | 1386406 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan20g0206 | - | - | lang:109335169 | 1432.93 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lan20g0206 | 20 | 1383262 | 1386406 | Lan4g1688 | 4 | 25644976 | 25649311 | LSH |