Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0187 ATGTTCACTTTGTTAGCACTTGATATCAAACTCCAAACACAAAAAATGGGAAGCACAATAAACCTTAGAAACTTCAAACTATGTTTCTCAAAATCAACAGAATCAGAAACAACAACAAACCACACTGCCACAGTTCCATCTTCATCACATGATGCTTATAATAATAATAACAACCCACCATTTCCAACTTCACCACCCTTGATCAAGAACTTCAACTCTCTCTATGAACCTGAACCTGAAGTAGCTGCTGATTTAGCAACTGCCTTAGCCTCTCAACGCTTCTTTTTCTCTTCTCCTGGTAATTCAAATTCCCTCATTGAATACACACGACAAAAGCATTCATCTTTGGTAGAGGGTGATAGTGAAAACAAGAATAAGAAGAAGAAGAAGAATAAGGTGTTGTTATTCAAGGGAAGTGTGGCGGTGCCAACTTACTCGCCGGATCCTTATTCAGATTTCCGGCGATCCATGCAGGAGATGGTGGAGGCGCGTCCTGAACTCATGGATGTTAACTCCAATTGGAATATTCTACATCAGCTTCTGCTTTCTTATCTTGCGCTTAATCCAAAACCCACTCATAATTTCATTCTAAGTGCTTTTTCTGATCTTCTCATTTCATTGATGGATGTTACAGTTTCATAA 642 0.3894 MFTLLALDIKLQTQKMGSTINLRNFKLCFSKSTESETTTNHTATVPSSSHDAYNNNNNPPFPTSPPLIKNFNSLYEPEPEVAADLATALASQRFFFSSPGNSNSLIEYTRQKHSSLVEGDSENKNKKKKKNKVLLFKGSVAVPTYSPDPYSDFRRSMQEMVEARPELMDVNSNWNILHQLLLSYLALNPKPTHNFILSAFSDLLISLMDVTVS* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0187 213 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 140 208 IPR006458 -
Lan20g0187 213 PANTHER TRANSCRIPTION REPRESSOR OFP12 82 209 - -
Lan20g0187 213 Pfam Transcriptional repressor, ovate 146 207 IPR006458 -
Lan20g0187 213 ProSiteProfiles OVATE domain profile. 142 206 IPR006458 -
Lan20g0187 213 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 82 209 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0187 Lan-Chr20 1236559 1237352 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lan20g0187 Ovate 1.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0187 - - aprc:113871147 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0187 20 1236559 1237352 Lan4g1717 4 25854861 25855891 LSH