Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0169 ATGGCAAATGAAGCCAACGATGATTTCCTTCAACAAATCCTCTCTCTCCCTTCTTCTGACTCTACATCTCTCTACCACTTAGACCAAGCTAGAGGAGTAGGAAGAGTAGTAGGAGGAGGAGGAGGAACCTTCATCAACCATCACCATGCTTCTTCAACTGCTAACCATAATCTTCCTCATGCCACACCCAACAATGTTTTTCATGGGCAACCCATGCTTACCAACGTTCCTATTGCTCCACATGCACCGGCGATGCGTCCTAGAGTCCGGGCTAGAAGGGGACAAGCAACTGATCCACACAGCATAGCCGAAAGGTTGCGTAGAGAAAGAATAGCTGAAAGAATCAGGGCTTTGCAAGAGCTGGTTCCTAGTGTCAACAAGACTGATAAAGCTATCATGCTTGATGAAATTGTGGATTATGTCAAGTTCTTAAGACTTCAAGTGAAGGTTTTGAGCATGAGTCGATTGGGCGGAGCTGGTGCAGTGGCACCACTGGTAACTGACATCCCATTGTCATTGGTCGAGGAGGAAGGAAACCAACCAGCTTGGGAGAAGTGGTCAAATGATGGCACAGAAACACAGGTAGCTAAGCTTATGGAAGAAAATGTAGGAGCTGCCATGCAGTTTCTTCAATCAAAGGCTCTCTGCATCATGCCCATTTCACTGGCATCAGCAATATATCAGTCACAACCATCAGACACCTCTAGCATAGTTAAGGTTGAAACTAATCCTCCTTCATAG 741 0.4602 MANEANDDFLQQILSLPSSDSTSLYHLDQARGVGRVVGGGGGTFINHHHASSTANHNLPHATPNNVFHGQPMLTNVPIAPHAPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDKAIMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSLVEEEGNQPAWEKWSNDGTETQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPSDTSSIVKVETNPPS* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0169 246 Pfam Helix-loop-helix DNA-binding domain 100 144 IPR011598 GO:0046983
Lan20g0169 246 SMART finulus 101 150 IPR011598 GO:0046983
Lan20g0169 246 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 93 154 IPR036638 GO:0046983
Lan20g0169 246 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 60 235 - -
Lan20g0169 246 Gene3D - 90 152 IPR036638 GO:0046983
Lan20g0169 246 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 95 144 IPR011598 GO:0046983
Lan20g0169 246 PANTHER TRANSCRIPTION FACTOR UNE12 ISOFORM X1 60 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0169 Lan-Chr20 1104633 1107120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0169 27 245 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 71.616 7.57e-95 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan20g0169 HLH 2.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0169 - - lang:109336118 433.721