Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0158 ATGGATTTTGCAAGTGGAAATGGCACTAGCTCTAGCACTGGATCTCCATGTGGGGCATGCAAGTTCCTTAGACGAAAGTGTGCACCTGATTGTATATTTGCTCCTTACTTTTGTTCTGAACAAGGAGCTGATAGATTTTCTGCTATACATAAAGTGTTTGGTGCTAGCAATGTTTCAAAGTTGCTCTTGCATATACCAGCTCATGATCGATGTGAAGCTGTAGTTACAATTGCTTATGAAGCACAAGCTCGTATAAGAGATCCTGTTTATGGTTGTGTCTCCCATATTTTTGCCTTACAACAACAGGTAGCATGCTTGCAGGCACAACTGATGCAAGCAAAGGCACAATTGGCAAATCAAAACCTGATAGAGAATCAGTGTTCAGGGAATGCTGTTGGACTATCAACATATCCATTTGGTGCAACTTCCATGATGAATCCTATATCTCCACAAAGTTCATTTGTGTCATCAATTGATCATGGAAGCATCAGTGATGGAATGAGCATGCAAGATATACAAAGCAGAGAAGATTCTTCATTCCAAGCTTGGGCTAAGAAAATTTCATATAACAATGACTTTGGTGAGCTCCAAGATTTGGCACACAGGATGATGCACATGAACTATTACTAG 630 0.4016 MDFASGNGTSSSTGSPCGACKFLRRKCAPDCIFAPYFCSEQGADRFSAIHKVFGASNVSKLLLHIPAHDRCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQAKAQLANQNLIENQCSGNAVGLSTYPFGATSMMNPISPQSSFVSSIDHGSISDGMSMQDIQSREDSSFQAWAKKISYNNDFGELQDLAHRMMHMNYY* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0158 209 ProSiteProfiles LOB domain profile. 15 117 IPR004883 -
Lan20g0158 209 Coils Coil 96 123 - -
Lan20g0158 209 PANTHER LOB DOMAIN CONTAINING PROTEIN 10 205 - -
Lan20g0158 209 Pfam Lateral organ boundaries (LOB) domain 16 114 IPR004883 -
Lan20g0158 209 PANTHER LOB DOMAIN-CONTAINING PROTEIN 16 10 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0158 Lan-Chr20 1027967 1029521 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0158 4 204 AS2 family AT2G42430 52.675 8.68e-75 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan20g0158 LOB 5.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0158 K13944 - gmx:100801508 263.077