Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0128 ATGATGAAAAACACAATATTATCAACAACAACAACTCCATCAACCCAAATAATAAACCATTTTCCAACCACCATGCTCTCAAATTATTCTAACTCTCCTCCATCTTCATCTTCTTCACCTCCTTCACTATCTCATTCACTTTCACCTTCTCAATCTCCTCCTCCTCCATCAGCTATGCCTCCTCCTCCTCCACCAATTGTGGTGGTTAGCCCTTGTGCTGCCTGCAAGATCCTCCGCCGGAGGTGTGTGGATAAGTGTGTCTTGGCTCCTTATTTTCCTCCTACTGATCCTCTCAAGTTTACCATTGCTCATAGAGTCTTTGGAGCAAGTAACATCATCAAGTTCTTGCAGGAACTACCAGAATCACAAAGAGAAGATGCAGTAAGCAGCATGGTATATGAAGCAAATGCTAGGATCAGAGACCCAGTGTATGGTTGTGCTGGTGCAATATGCCAACTTCAAAAGCAAATTAGTGAGCTACAAGCACAACTAGCAAAAGCACAAGCTGAGGTAGTTAACATGCAATGCCAACAAGCTAATTTAGTTGCTCTAATTTGCATGGAAATGACTCAATCACAAGATCAGAACATGCTTCAGCCTCAACCTAATGATGATGATATGAACTGCTTCTTAGATGACACAGATTTTGCCTCTGCTTGGGACCCTCTATGGACATGA 678 0.4248 MMKNTILSTTTTPSTQIINHFPTTMLSNYSNSPPSSSSSPPSLSHSLSPSQSPPPPSAMPPPPPPIVVVSPCAACKILRRRCVDKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQREDAVSSMVYEANARIRDPVYGCAGAICQLQKQISELQAQLAKAQAEVVNMQCQQANLVALICMEMTQSQDQNMLQPQPNDDDMNCFLDDTDFASAWDPLWT* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0128 225 Pfam Lateral organ boundaries (LOB) domain 71 168 IPR004883 -
Lan20g0128 225 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 62 213 - -
Lan20g0128 225 MobiDBLite consensus disorder prediction 28 62 - -
Lan20g0128 225 MobiDBLite consensus disorder prediction 28 46 - -
Lan20g0128 225 ProSiteProfiles LOB domain profile. 70 171 IPR004883 -
Lan20g0128 225 Coils Coil 150 177 - -
Lan20g0128 225 MobiDBLite consensus disorder prediction 47 62 - -
Lan20g0128 225 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 62 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0128 Lan-Chr20 782766 784420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0128 67 225 AS2 family AT1G07900 70.122 2.59e-78 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan20g0128 LOB 1.8e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0128 - - gmx:100806667 289.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0128 20 782766 784420 Lan4g1771 4 26426295 26428052 LSH