Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0117 ATGGGAATTTCTTCACAGCCTTCCCTTGTTTCCATGTCTTTGACAAATCTGCTTCAGGGAAGTGAAGGACACAGAAACTCATCATATGGGTATTTGTGGAACAAAGTGTTGGAAGGTGGTAAAGTCACAAAGAAAAGTGTCCAATATAAGAGGCCAAGAAGGATTCTAATGAAGAGAAGGGTTGGTTCTAGAAGAGGGGTTAAAGGAATACAGAGAAAGGTTAGAACATTGAAGAAACTTGTACCAAACAGTGAATCTTTGGAGTTGGATGGACTCTTCAGAGAAACAGCTGATTACATATTGGCTCTACAAACAAGAGTGAGAATCATGAAGGTTCTGGTTAATGTGTTGACAGGGTCTGATGAGTGA 369 0.4011 MGISSQPSLVSMSLTNLLQGSEGHRNSSYGYLWNKVLEGGKVTKKSVQYKRPRRILMKRRVGSRRGVKGIQRKVRTLKKLVPNSESLELDGLFRETADYILALQTRVRIMKVLVNVLTGSDE* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0117 122 PANTHER TRANSCRIPTION FACTOR UPBEAT1 4 119 - -
Lan20g0117 122 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 4 119 IPR044660 GO:0006355
Lan20g0117 122 CDD bHLH_AtIBH1_like 59 114 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0117 Lan-Chr20 708033 708607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0117 62 121 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 55.738 4.64e-19 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0117 - - gmx:100794627 144.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0117 20 708033 708607 Lan4g1787 4 26532832 26533281 LSH