Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0116 ATGCCAACACGAACAACAGCAACAGATTTAGAAACTCCAAATGAACACTCATCCAAACACACCCTTCACCCTGTATTCTCTCCTTCTTACCCAATCACTCTTAAGTTCATGGACGTGAATTACCGAGTTAAGATGATAGATAATAAAAGAGGGTGCATCATTAAGGCTATGTTTGAATCATCACAACCGTCAGATCAAATTATATCTAAGGAAGAGAGAATAATTTTGAAATCCGTAACGGGAATAGCGTACCCGGGGGAGATCTTAGCCATCCTTGGTCCATCAGGTAGTGGTAAATCAACGCTCTTAAATGCTCTCTCAGGGAGACTCCATGGACACGCACTCACAGGAACAATCCTCGCTAACTCTTTCAAATTAACCAAACCGGTTCTCCGTCGAACCGGGTTCGTCACCCAAGACGACATCCTCTACCCTCACCTCACGGTTCGCGAGACTCTCGTCTTCTGCTCCATGCTCCGCCTCCCGAGAACCCTGCCGCGAGAGGCTAAGATCGCGGCGGCGGAGTCGGTCATCGTCGAATTAGGGTTATCAAAGTGCCAAGACACTATAATCGGAAACAGCTTCATCCGTGGTGTCTCCGGCGGTGAACGGAAGCGCGTGAGCATAGCGCATGAGATGCTGGTGGACCCGAGTTTGCTGATACTGGATGAGCCTACCTCGGGGCTGGATGCGACGGCGGCGTACCGGCTGGTGAAGACGCTGGGGGAACTGGCGAAGAAAGGGAAGACGGTGGTGACGTCGGTGCATCAACCGTCGAGTCGCGTATACCAGATGTTCGATAAGGTGATAGTGCTTTCGGAAGGACAGTGTTTGTATTCCGGAAAAGGAAACGATGCTATGAGCTACTTTGAATCGATTGGGTTCGCTCCATCTTTTCCGGTTAATCCCGCAGATTTTCTGCTCGATCTCGCTAACGGTGTTTGCCATGTTGATGGTCTAGGTGAAAGAGATAGGCCAAACATTAAGCAGAACCTAATTCATTCATACAACACAATACTGGCTCCTAAGGTAAAAGCTGCCTGCATGGACACTGCCAGTGTTCCTAACAAAAACACTCACCCTTTAGGAAGCAACCCTTCCAAAAAATGTAGACATAGTGACAGGGTTAGCTTATTTGATTGGTTCAGCCAGTTTAGTATTCTGCTCCATAGAAGCATCAAAGAAAGAAAACATGAATCCTTCAATACACTGAGAGTCTTTCAAGTTCTTGCTGCAGCACTATTAGCTGGTTTAATGTGGTGGCACTCAGACTATAGGAATGTTCAAGATAGGCTTGGTTTGCTCTTTTTCATTTCCATCTTTTGGGGAGTATTCCCATCTTTCAACTCTGTTTTTGCATTTCCTCAAGAACGTGCCATCTTTATGAAAGAGAGAGCTTCTGGTATGTACACATTGTCTTCCTATTTTATGGCTAGAATTGTTGGAGACCTTCCCATGGAGCTTATTCTTCCCACGGTTTTCCTCATTGTGACATATTGGATGGGTGGATTAAATCCTGATTTTTGGTCTTTTGTGTTGACTTTGTTGGTTCTTCTTGGATATGTGCTTGTGTCACAAGGTCTTGGGCTTGCTTTAGGTGCTGCAATCATGGATGCTAAACAGGCTTCCACAGTATCAACAGTGACAATGTTAGCATTTGTCTTAACAGGTGGCTACTATGTCCATAAGGTGCCACCTTGTATGGCTTGGATCAAATACATTTCCACAACCTTTTACAGTTATAGGCTTCTGATAAGAATCCAATATGGTGATGGCAACAAAATCTTACATCTTTTGGGATGCTATCATGGTGGGAGTGATAGGGCCAGCTGCAAATTTGTTGAAGAAGATGTAGTGGAGCAAATTAGCACTGTGGGAAGTATTGGGGTGTTGTTCCTCATGTTTGTGGGTTATAGATTATTGGCCTACCTTGCCTTGAGGAGCATCAAGAGTTGA 1956 0.4535 MPTRTTATDLETPNEHSSKHTLHPVFSPSYPITLKFMDVNYRVKMIDNKRGCIIKAMFESSQPSDQIISKEERIILKSVTGIAYPGEILAILGPSGSGKSTLLNALSGRLHGHALTGTILANSFKLTKPVLRRTGFVTQDDILYPHLTVRETLVFCSMLRLPRTLPREAKIAAAESVIVELGLSKCQDTIIGNSFIRGVSGGERKRVSIAHEMLVDPSLLILDEPTSGLDATAAYRLVKTLGELAKKGKTVVTSVHQPSSRVYQMFDKVIVLSEGQCLYSGKGNDAMSYFESIGFAPSFPVNPADFLLDLANGVCHVDGLGERDRPNIKQNLIHSYNTILAPKVKAACMDTASVPNKNTHPLGSNPSKKCRHSDRVSLFDWFSQFSILLHRSIKERKHESFNTLRVFQVLAAALLAGLMWWHSDYRNVQDRLGLLFFISIFWGVFPSFNSVFAFPQERAIFMKERASGMYTLSSYFMARIVGDLPMELILPTVFLIVTYWMGGLNPDFWSFVLTLLVLLGYVLVSQGLGLALGAAIMDAKQASTVSTVTMLAFVLTGGYYVHKVPPCMAWIKYISTTFYSYRLLIRIQYGDGNKILHLLGCYHGGSDRASCKFVEEDVVEQISTVGSIGVLFLMFVGYRLLAYLALRSIKS* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0116 651 Pfam ABC-2 type transporter 384 588 IPR013525 GO:0016020|GO:0140359
Lan20g0116 651 Pfam ABC transporter 77 227 IPR003439 GO:0005524
Lan20g0116 651 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 12 649 - -
Lan20g0116 651 SMART AAA_5 85 276 IPR003593 -
Lan20g0116 651 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 34 299 IPR003439 GO:0005524
Lan20g0116 651 PANTHER ABC TRANSPORTER G FAMILY MEMBER 25 12 649 - -
Lan20g0116 651 Pfam ABC-2 type transporter 256 328 IPR043926 GO:0140359
Lan20g0116 651 MobiDBLite consensus disorder prediction 1 22 - -
Lan20g0116 651 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 293 IPR027417 -
Lan20g0116 651 Gene3D - 65 293 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0116 Lan-Chr20 695189 701006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0116 86 313 Calmodulin-binding Proteins AT2G36910 27.586 8.72e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0116 K05681 - gmx:100812127 1010.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0116 20 695189 701006 Lan20g0116 20 695189 701006 ECH
Lan8g0739 8 9625537 9630348 Lan20g0116 20 695189 701006 LSH