Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0111 ATGGATTCTTTCTCCTCGAAAAGTAACAACAACATTGTTAAGCCTTCCCTTCAAGTAGAGGCATCGGTTCCAATTGAGTCAAGTCCTTTACGTAAGATAATCGCGGTTGCTTCCATTGCCGCCGGTGTTCAATTCGGGTGGGCCCTACAACTCTCTCTTCTCACTCCTTATGTTCAGTTACTTGGCATCCCTCACAAATGGTCCTCCTTCATCTGGCTCTGCGGCCCCATCTCCGGTATGCTTGTTCAGCCCTTCGTCGGTTACCACTCCGATCGTTGTACCTCCCGCTTCGGACGTCGCCGTCCTTTCATCGCCGCCGGTGCTCTTGCTGTCGCCGTCGCTGTTTTCCTCATTGGCTACGCCGCTGACCTAGGCCATGCCACCGGCGACGACCTCGCTCGCCAATCACGCCCCCGCGCTATCGCGATCTTCGTCGTTGGATTTTGGATCCTCGACGTGGCGAATAACATGCTTCAGGGACCTTGCAGAGCACTACTCGCTGACCTCTCCGCCGGCGACCAGAAGAAAACGAGGAACGCTAATGCGTTCTTCTCGTTCTTCATGGCCGTCGGAAATGTTCTAGGTTACGCCGCCGGTTCATACAGCGGCTTACATAAGATATTCCCGTTCACTGTGACGAAAGCATGCGATATTTACTGCGCAAATTTGAAAAGCTGCTTCTTCATTTCAATCATTCTTCTCCTTACACTCTCAACTATTGCGTTGTTCTACGTGAAAGAAAGAGCATTTGTTCGTGATGAGAAGAAGTTAGAAGAAGAAGAAGAAAATGTTTCGGTTCCATGTTTTGGGGAATTATTAGGTGCATTTCATGAACTGAAGAAACCGATGTGGATCCTATTATTAGTGACGTGTCTTAACTGGATTGCTTGGTTTCCATTCTTATTATTCGACACTGATTGGATGGGGAAAGAAGTGTACGGAGGAAGCGTTGGAGATGGAAAAGCTTCAAAGGCGTACGATAAGGGAGTGCGCGCGGGTGCGTTGGGGTTAATGTTAAACTCAGTAGTTCTTGGAGTGACGTCACTTGGGGTTGAGTTATTAGCGCGTGTGGTTGGGGGCGTGAAGAGGTTATGGGGTATTGTTAACTTCTTGCTTGCTATTTCTTTAGCCATAACGGTGTTAGTTACGAAGATGGCTCAACATTCACGACACTACCCCGACGGTGATATAAACGCCGATCCACTGCCACCTACCGCCGCTATCAACGCCGCCGCTTTCACTCTTTTCTCGCTTCTCGGAATCCCTCTCGCGATTACTTACAGCATACCCTTTGCTATGGCATCTATTTTTTCCACCACCACAGGGGCTGGCCAAGGGTTATCTCTTGGAGTTCTCAATCTTGCTATAGTCATACCTCAGATGATTGTGTCAGTGCTCAGTGGACCATGGGATGATGCTTTTGGTGGTGGTAACTTGCCAGCATTCGTAGTGGGTGCTGTGGCAGCCGCAGCCAGTGGCATATTATGCATAGTCCTGCTGCCATCTCCACCGCCAGAATTGGCCAAGGCTACAACAACTACTGGAGGAGGGTTCCATTAA 1560 0.4949 MDSFSSKSNNNIVKPSLQVEASVPIESSPLRKIIAVASIAAGVQFGWALQLSLLTPYVQLLGIPHKWSSFIWLCGPISGMLVQPFVGYHSDRCTSRFGRRRPFIAAGALAVAVAVFLIGYAADLGHATGDDLARQSRPRAIAIFVVGFWILDVANNMLQGPCRALLADLSAGDQKKTRNANAFFSFFMAVGNVLGYAAGSYSGLHKIFPFTVTKACDIYCANLKSCFFISIILLLTLSTIALFYVKERAFVRDEKKLEEEEENVSVPCFGELLGAFHELKKPMWILLLVTCLNWIAWFPFLLFDTDWMGKEVYGGSVGDGKASKAYDKGVRAGALGLMLNSVVLGVTSLGVELLARVVGGVKRLWGIVNFLLAISLAITVLVTKMAQHSRHYPDGDINADPLPPTAAINAAAFTLFSLLGIPLAITYSIPFAMASIFSTTTGAGQGLSLGVLNLAIVIPQMIVSVLSGPWDDAFGGGNLPAFVVGAVAAAASGILCIVLLPSPPPELAKATTTTGGGFH* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0111 519 CDD MFS_SLC45_SUC 33 479 - -
Lan20g0111 519 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 15 510 - -
Lan20g0111 519 Gene3D MFS general substrate transporter like domains 30 251 IPR036259 -
Lan20g0111 519 PANTHER SUGAR TRANSPORTER 15 510 - -
Lan20g0111 519 SUPERFAMILY MFS general substrate transporter 32 504 IPR036259 -
Lan20g0111 519 Pfam MFS/sugar transport protein 38 296 - -
Lan20g0111 519 TIGRFAM GPH_sucrose: sucrose/H+ symporter 29 504 IPR005989 GO:0005887|GO:0008515|GO:0015770
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0111 Lan-Chr20 668817 671340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0111 5 519 Sucrose Transporter Gene Family AT1G71890 66.409 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0111 K15378 - gmx:547679 806.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0742 8 9641183 9644166 Lan20g0111 20 668817 671340 LSH
Lan20g0111 20 668817 671340 Lan4g1793 4 26562947 26566399 LSH
Lan20g0111 20 668817 671340 Lan7g1038 7 11029855 11032584 PCT