Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0109 ATGGACAGAAAGTTCTGGGCTTTAGTTTTCATCTTCTCTATCTTATTATTTCATCCACTATGCTTCATCTCTGCTAACATGGAAGGTGATGCTTTACATAGCCTGAGGACAAATTTACAGGACCCTAACAATGTTTTGCAAAGTTGGGATCCTACACTTGTTAATCCCTGTACATGGTTTCATGTAACATGTGACAATGAGAACAGTGTCATAAGAGTTGATCTGGGAAATGCTGCTTTATCTGGTCAACTTGTTCCACAGCTTGGTCAGCTCAAGAATTTGCAGTATCTGGAACTTTACAGCAATAACATCACTGGCCCTATTCCAAGTGACCTGGGGAATCTTACTAACTTGGTGAGCTTGGATCTGTACCTAAACACTTTCACTGGCCCTATCCCAGATTCATTGGGCAAGCTTTCAAAATTGCGTTTCCTGGTAAAGACTGTTTCCCTGGTATGTCTGTCTAAGGATAGTCGGCTTAACAACAATAGCCTGTCAGGTTCTATACCCATGCCGCTGACTAATATTTCATCTCTCCAAGTTCTGGACTTGTCCAATAACCGTCTATCAGGTGTGGTTCCTGATAATGGCTCCTTCTCATTATTCACCCCTATCAGTTTTGCCAACAATTTGGCTCTATGTGGACCAGTCACTGGCCACCCTTGTCCAGGCTCTCCTCCATTTTCTCCTCCTCCCCCATTTGTCCCTCCACCCCCGATTTCTGCCCCAGGAGGTAATAGTGATACCGGGGCAATAGCTGGAGGAGTCGCTGCAGGCGCTGCTCTATTATTTGCTGCACCTGCAATTGCATTTGCATGGTGGCGTCGGAGGAAACCTCAAGAATTTTTCTTTGACGTTCCTGCTGAAGAGGATCCTGAAGTCCATCTTGGGCAGCTTAAGAGGTTCTCACTACGAGAACTGCAAGTTGCAACAGATACTTTCAGCAATAAGAACATTCTTGGGAGAGGAGGCTTTGGTAAGGTGTACAAAGGACGCTTGGCTGATGGTTCATTAGTTGCTGTGAAAAGATTGAAAGAGGAGCGCACACCTGGTGGGGAGCTTCAGTTTCAGACCGAAGTAGAGATGATCAGCATGGCCGTGCACAGGAATCTCCTCCGTTTACGTGGGTTTTGTATGACACCAACAGAACGGCTACTTGTTTATCCCTACATGGCCAATGGAAGTGTTGCCTCATGCTTAAGAGAGCGTCCTCCACATCAAGAACCCCTAGATTGGCCAACAAGGAAAAGAATAGCTTTGGGGTCAGCAAGGGGTCTTTCATATTTGCATGATCATTGTGATCCAAAGATTATTCATCGAGATGTGAAAGCTGCAAACATACTGTTGGATGAGGAGTTCGAGGCTGTTGTCGGGGATTTTGGATTGGCAAAACTAATGGATTATAAGGACACCCATGTGACAACTGCTGTACGAGGCACAATTGGGCACATAGCTCCAGAGTACCTATCTACTGGTAAATCTTCAGAGAAAACTGACGTTTTTGGTTATGGTATCATGCTTCTGGAGCTGATCACTGGACAAAGAGCTTTTGACCTTGCTCGGCTTGCCAACGACGATGATGTTATGCTGCTTGATTGGGTTAAAGGACTGCTGAAAGAGAAAAAGCTTGAAATGTTGGTTGATCCAGATCTACATAACAATTATATAGAAGCAGAGGTAGAACAGTTAATCCAGGTTGCACTACTGTGCACACAAGGTTCCCCGATGGAGCGACCGAAGATGTCAGAAGTGGTGAGAATGCTTGAAGGAGATGGGTTGGCAGAAAGATGGGATGAGTGGCAAAAAGTGGAAATTCTCAGGCAGGAAGTGGAGCTGGCCCCTCATCCCAATTCTGATTGGATTGTTGACTCAACTGAAAATTTACATGCAGTTGAGTTATCTGGTCCTAGCTGA 1914 0.4519 MDRKFWALVFIFSILLFHPLCFISANMEGDALHSLRTNLQDPNNVLQSWDPTLVNPCTWFHVTCDNENSVIRVDLGNAALSGQLVPQLGQLKNLQYLELYSNNITGPIPSDLGNLTNLVSLDLYLNTFTGPIPDSLGKLSKLRFLVKTVSLVCLSKDSRLNNNSLSGSIPMPLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLALCGPVTGHPCPGSPPFSPPPPFVPPPPISAPGGNSDTGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDTFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPHQEPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLHNNYIEAEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWDEWQKVEILRQEVELAPHPNSDWIVDSTENLHAVELSGPS* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0109 637 Pfam Protein kinase domain 315 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0109 637 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Lan20g0109 637 SMART serkin_6 314 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0109 637 ProSiteProfiles Leucine-rich repeat profile. 178 199 IPR001611 GO:0005515
Lan20g0109 637 Gene3D Transferase(Phosphotransferase) domain 1 391 608 - -
Lan20g0109 637 PANTHER LEUCINE-RICH REPEAT DOMAIN, L DOMAIN-LIKE PROTEIN-RELATED 10 636 IPR031048 GO:0004675|GO:0005102|GO:0006468
Lan20g0109 637 CDD STK_BAK1_like 320 591 - -
Lan20g0109 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Lan20g0109 637 Gene3D Ribonuclease Inhibitor 24 224 IPR032675 -
Lan20g0109 637 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 10 636 - -
Lan20g0109 637 Pfam Leucine Rich Repeat 178 195 IPR001611 GO:0005515
Lan20g0109 637 SUPERFAMILY Protein kinase-like (PK-like) 293 589 IPR011009 -
Lan20g0109 637 ProSiteProfiles Protein kinase domain profile. 314 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0109 637 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
Lan20g0109 637 Gene3D Phosphorylase Kinase; domain 1 283 390 - -
Lan20g0109 637 SUPERFAMILY L domain-like 28 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0109 Lan-Chr20 656057 666281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0109 1 636 Receptor kinase-like Gene Family AT1G71830 87.127 0.0 1037
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lan20g0109 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0109 K13418 - gmx:100789884 1113.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0109 20 656057 666281 Lan20g0109 20 656057 666281 ECH
Lan20g0109 20 656057 666281 Lan4g1798 4 26617056 26622358 LSH